Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 MIR5089-201ENST00000580047 84 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AC103591.3-201ENST00000608684 209 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 MIR6134-201ENST00000617606 109 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 YWHAEP7-203ENST00000622054 312 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AC024940.5-201ENST00000622889 474 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AC135776.4-201ENST00000624300 1904 ntBASIC2.34□□□□□ -2.04
RNF41Q9H4P4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RNF41Q9H4P4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 RNU4-75P-201ENST00000364621 146 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 RN7SKP226-201ENST00000364912 300 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 Y_RNA.318-201ENST00000365131 97 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 MIR578-201ENST00000384828 96 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 RNU6-387P-201ENST00000411331 105 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AL358075.3-201ENST00000426289 226 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 WARS2P1-201ENST00000429678 537 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 RPS15AP27-201ENST00000449183 343 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AC023194.1-201ENST00000493084 308 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 FAM92A1P2-202ENST00000504766 877 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 COX6CP5-201ENST00000527162 228 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 FAM92A1P1-201ENST00000528023 890 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 OR5AL2P-201ENST00000532185 920 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AC006199.1-201ENST00000548728 219 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AGGF1P4-201ENST00000568249 801 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 DEFB131E-202ENST00000602581 683 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AC073648.5-201ENST00000603502 305 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AC104073.3-201ENST00000610942 955 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AL359740.1-201ENST00000624340 592 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF41Q9H4P4 AC010889.1-201ENST00000566193 2666 ntBASIC2.33□□□□□ -2.04
RNF41Q9H4P4 CDC27P3-201ENST00000635418 1910 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 MTND5P26-201ENST00000426018 1752 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 SNORD3E-201ENST00000362899 217 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 RNU6-1120P-201ENST00000362988 108 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 SNORA62.1-201ENST00000364287 154 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 SNORA68.1-201ENST00000364537 132 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 RNU4-48P-201ENST00000365559 182 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 RNU6-395P-201ENST00000365662 106 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 Y_RNA.436-201ENST00000384097 102 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 RNU6-606P-201ENST00000384721 111 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC019129.1-201ENST00000403786 261 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AL513475.1-201ENST00000406602 315 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 MTATP6P18-201ENST00000417994 673 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AL353193.1-201ENST00000421444 268 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC000111.3-201ENST00000433478 193 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AL360271.2-201ENST00000447710 161 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC003071.1-201ENST00000451219 789 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AL162395.1-201ENST00000457882 422 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 RNU6-717P-201ENST00000459076 104 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC079804.2-201ENST00000490376 200 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 HMGB1P29-201ENST00000505659 499 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC104806.1-201ENST00000508720 308 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC112206.3-201ENST00000514578 389 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AP005435.4-201ENST00000529514 284 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 SUB1P2-201ENST00000556401 297 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 LINC00933-203ENST00000559812 219 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC005498.1-201ENST00000592125 465 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AL391813.1-201ENST00000603098 260 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC091805.2-201ENST00000603848 235 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC091152.3-201ENST00000604227 325 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC011939.3-201ENST00000613686 466 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC244517.12-201ENST00000623581 663 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF41Q9H4P4 U6.99-201ENST00000637524 83 ntBASIC2.32□□□□□ -2.04
RNF41Q9H4P4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
RNF41Q9H4P4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF41Q9H4P4 AL139276.1-201ENST00000311910 1001 ntBASIC2.31□□□□□ -2.04
RNF41Q9H4P4 RNU6-259P-201ENST00000383999 107 ntBASIC2.31□□□□□ -2.04
RNF41Q9H4P4 RNU6-550P-201ENST00000391057 101 ntBASIC2.31□□□□□ -2.04
RNF41Q9H4P4 RNU2-16P-201ENST00000410712 136 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms