Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 MIR3611-201ENST00000584484 83 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 MIR98-201ENST00000606724 119 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AL589743.7-201ENST00000612637 233 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 DUSP12P1-201ENST00000612874 516 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC092656.1-203ENST00000624134 423 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 RNU6-778P-201ENST00000363269 103 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 RNU6-1097P-201ENST00000363586 107 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 RNU4-24P-201ENST00000364565 139 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 Y_RNA.359-201ENST00000365498 102 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 Y_RNA.534-201ENST00000384599 112 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AL109913.1-201ENST00000421173 514 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AL591212.2-201ENST00000433923 257 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 GPR143P-201ENST00000434155 205 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 MTND4P25-201ENST00000441039 533 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC079781.2-201ENST00000446424 169 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 MTATP6P7-201ENST00000453315 681 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 MTCYBP1-201ENST00000454315 1119 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 RPL23AP63-201ENST00000498752 471 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC023141.11-201ENST00000508864 202 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC117522.1-201ENST00000509821 380 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 FAM92A1P1-201ENST00000528023 890 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC024619.4-201ENST00000580924 316 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC002984.1-201ENST00000591692 448 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 BNIP3P9-201ENST00000603714 553 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC098614.4-201ENST00000607601 462 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC091834.1-201ENST00000614543 472 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC138649.3-201ENST00000622154 254 ntBASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
NXF3Q9H4D5 AC080128.1-201ENST00000474389 1917 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 RNU6-288P-201ENST00000363690 104 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 SNORA51.11-201ENST00000384442 131 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 SNORD23.1-201ENST00000408212 104 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AL663109.1-201ENST00000411498 844 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC114491.1-201ENST00000416095 246 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC133104.1-201ENST00000429100 218 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AL591704.1-201ENST00000432574 275 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC132479.1-201ENST00000449160 144 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC093899.1-201ENST00000457984 376 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 TPT1P7-201ENST00000458300 517 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 RPS29P20-201ENST00000489592 171 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 MTND3P5-201ENST00000512798 333 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 RN7SKP298-201ENST00000515950 94 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 RNU6-410P-201ENST00000517006 107 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 RNU6-548P-201ENST00000517083 115 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 RNA5SP165-201ENST00000517142 115 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AP005902.1-201ENST00000521358 186 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AL391840.1-201ENST00000571144 367 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC068790.2-201ENST00000602601 557 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC022893.3-201ENST00000607665 437 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 uc_338.14-201ENST00000613162 166 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC011939.3-201ENST00000613686 466 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC136475.10-201ENST00000620253 385 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 AC103710.2-202ENST00000641454 2853 ntBASIC2.07□□□□□ -2.08
NXF3Q9H4D5 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.07□□□□□ -2.08
NXF3Q9H4D5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NXF3Q9H4D5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.06□□□□□ -2.08
NXF3Q9H4D5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NXF3Q9H4D5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NXF3Q9H4D5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.06□□□□□ -2.08
NXF3Q9H4D5 RNU6-181P-201ENST00000363225 107 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 Y_RNA.194-201ENST00000363985 102 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 RNU6-282P-201ENST00000365357 103 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 RNU6-190P-201ENST00000384154 102 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 RNU6-74P-201ENST00000384235 107 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 SNORA24.1-201ENST00000384401 135 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.06□□□□□ -2.08
NXF3Q9H4D5 AC092809.3-201ENST00000415453 231 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.06□□□□□ -2.08
NXF3Q9H4D5 EIF1AXP1-201ENST00000419267 435 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.06□□□□□ -2.08
NXF3Q9H4D5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.06□□□□□ -2.08
NXF3Q9H4D5 SKA2P1-201ENST00000425592 390 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 AL592045.1-201ENST00000429867 352 ntBASIC2.06□□□□□ -2.08
NXF3Q9H4D5 RPL23AP30-201ENST00000432419 501 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms