Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC008267.5-201ENST00000424928 265 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 HMGN2P31-201ENST00000432430 273 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 HMGB1P12-201ENST00000438594 598 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AL136097.1-201ENST00000456945 913 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC133134.1-201ENST00000466800 359 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-377P-201ENST00000515965 102 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 RNU2-27P-201ENST00000516185 142 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 RNU1-95P-201ENST00000516357 160 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 RNU1-103P-201ENST00000516502 125 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 RNU1-128P-201ENST00000516704 160 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 SNORD116.3-201ENST00000517176 78 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC007991.1-201ENST00000522680 631 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC103996.1-201ENST00000555468 102 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 LINC00933-203ENST00000559812 219 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 MIR3976-201ENST00000606807 139 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AL161629.2-201ENST00000615347 275 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC138627.2-201ENST00000624202 601 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 MIR7153-201ENST00000637758 57 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AF127577.6-201ENST00000623352 2191 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 FAM35BP-202ENST00000497389 3337 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 PWAR6-201ENST00000552334 4618 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 MTND5P16-201ENST00000460269 1703 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 U8.8-201ENST00000365399 135 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AC017083.1-201ENST00000428093 483 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AL159987.2-201ENST00000432754 307 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 MTATP6P7-201ENST00000453315 681 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 MTND5P22-201ENST00000458380 195 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 SNRPGP3-201ENST00000469405 227 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 Y_RNA.687-201ENST00000516558 91 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 Y_RNA.720-201ENST00000517166 92 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 SUB1P3-201ENST00000564581 315 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 MIR4513-201ENST00000581077 86 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AL355598.1-201ENST00000604169 202 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AP000942.4-201ENST00000604811 241 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AC004852.3-201ENST00000614131 326 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 U2.21-201ENST00000637295 81 ntBASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
AMBRA1Q9C0C7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 MFSD8-236ENST00000641509 4050 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 Y_RNA.364-201ENST00000365532 101 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 Y_RNA.496-201ENST00000384444 101 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-985P-201ENST00000410182 104 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 AL117339.3-201ENST00000418733 162 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 MTND3P2-201ENST00000438452 342 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 AC013470.1-201ENST00000453438 462 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 U8.21-201ENST00000459536 136 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 RPL23AP62-201ENST00000463396 453 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 RPL17P19-201ENST00000489069 552 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 AK3P2-201ENST00000507976 429 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 CYCSP39-201ENST00000565821 309 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 AC010653.1-201ENST00000571108 881 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 AC009314.1-201ENST00000603871 304 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 AL078596.1-201ENST00000624856 447 ntBASIC3.29□□□□□ -1.88
AMBRA1Q9C0C7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms