Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.52□□□□□ -2.33
SCAPERQ9BY12 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.52□□□□□ -2.33
SCAPERQ9BY12 AC013476.2-201ENST00000614456 459 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 MIR8065-201ENST00000620577 100 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.52□□□□□ -2.33
SCAPERQ9BY12 AC099654.5-201ENST00000636479 350 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 RNU6-414P-201ENST00000363705 104 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.51□□□□□ -2.33
SCAPERQ9BY12 SNORD14D-201ENST00000384390 87 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 MIR10B-201ENST00000385011 110 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 SNRPEP9-201ENST00000436794 238 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SCAPERQ9BY12 PRELID3BP1-201ENST00000457142 540 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 MEMO1P3-201ENST00000459811 302 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.51□□□□□ -2.33
SCAPERQ9BY12 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.51□□□□□ -2.33
SCAPERQ9BY12 AC136628.3-201ENST00000521868 290 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 AC079598.5-201ENST00000547460 117 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 AC239868.4-201ENST00000608318 671 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 AC073569.3-201ENST00000619055 682 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 MIR8063-201ENST00000621930 81 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 AL138713.1-201ENST00000624026 2130 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 AC017037.3-201ENST00000625016 472 ntBASIC0.51□□□□□ -2.33
SCAPERQ9BY12 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.51□□□□□ -2.33
SCAPERQ9BY12 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.5□□□□□ -2.33
SCAPERQ9BY12 RNU6-288P-201ENST00000363690 104 ntBASIC0.5□□□□□ -2.33
SCAPERQ9BY12 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.5□□□□□ -2.33
SCAPERQ9BY12 RNU2-64P-201ENST00000411315 191 ntBASIC0.5□□□□□ -2.33
SCAPERQ9BY12 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.5□□□□□ -2.33
SCAPERQ9BY12 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.5□□□□□ -2.33
SCAPERQ9BY12 PTGES3P1-201ENST00000439531 483 ntBASIC0.5□□□□□ -2.33
SCAPERQ9BY12 AC145146.1-201ENST00000496370 254 ntBASIC0.5□□□□□ -2.33
SCAPERQ9BY12 RNA5SP285-201ENST00000516619 119 ntBASIC0.5□□□□□ -2.33
SCAPERQ9BY12 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.5□□□□□ -2.33
SCAPERQ9BY12 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.5□□□□□ -2.33
SCAPERQ9BY12 NDUFA8P1-201ENST00000605525 367 ntBASIC0.5□□□□□ -2.33
SCAPERQ9BY12 AL021879.1-201ENST00000611756 288 ntBASIC0.5□□□□□ -2.33
SCAPERQ9BY12 AC107075.1-201ENST00000613695 314 ntBASIC0.5□□□□□ -2.33
SCAPERQ9BY12 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.5□□□□□ -2.33
SCAPERQ9BY12 MRPL35P1-201ENST00000404272 572 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 RPL26P27-201ENST00000414397 437 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 AL353621.1-201ENST00000418219 243 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 NANOGP2-201ENST00000435391 727 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 AC010409.1-201ENST00000487382 476 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 RNU4-77P-201ENST00000516692 156 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 CYP3A52P-201ENST00000563326 91 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.49□□□□□ -2.33
SCAPERQ9BY12 AC002550.2-201ENST00000621246 394 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 AC027335.2-201ENST00000624030 375 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 AC104820.1-201ENST00000624183 307 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 MIR4275-201ENST00000636486 87 ntBASIC0.49□□□□□ -2.33
SCAPERQ9BY12 AC138393.1-203ENST00000327086 343 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 RNU1-96P-201ENST00000364163 162 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 Y_RNA.294-201ENST00000364916 102 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 RNU6-418P-201ENST00000384035 107 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 RNU2-48P-201ENST00000410694 191 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 MTCYBP38-201ENST00000417160 1123 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.48□□□□□ -2.33
SCAPERQ9BY12 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.48□□□□□ -2.33
SCAPERQ9BY12 RPL31P3-201ENST00000458430 332 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 RNVU1-2-201ENST00000516326 135 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 ARL2BPP5-201ENST00000523141 481 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.48□□□□□ -2.33
SCAPERQ9BY12 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.48□□□□□ -2.33
SCAPERQ9BY12 AC009950.2-201ENST00000636548 183 ntBASIC0.48□□□□□ -2.33
SCAPERQ9BY12 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.48□□□□□ -2.33
SCAPERQ9BY12 U3.8-201ENST00000363675 217 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 RNU6-611P-201ENST00000384276 104 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AL031577.2-201ENST00000404133 280 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 RNU6-564P-201ENST00000410983 104 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 FAM204CP-201ENST00000424489 642 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC244023.1-201ENST00000426884 112 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.47□□□□□ -2.33
SCAPERQ9BY12 MTCO3P17-201ENST00000443775 513 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC087477.1-201ENST00000465747 340 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 PTP4A1P4-201ENST00000512479 322 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC006518.2-201ENST00000542513 940 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AP001429.1-201ENST00000602568 530 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC022387.2-201ENST00000604050 448 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC242498.1-201ENST00000604134 111 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC112220.3-201ENST00000605502 502 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC243994.1-201ENST00000618627 109 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 RNU6-891P-201ENST00000384280 111 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC019070.1-201ENST00000415008 1024 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 EIF1P1-201ENST00000421436 341 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AL353691.1-201ENST00000451332 387 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 SNORD124-201ENST00000459577 104 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC112771.1-201ENST00000463581 102 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AL160314.1-201ENST00000490836 438 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 NRON-201ENST00000517270 370 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 MIR3937-201ENST00000580135 106 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AL022345.2-201ENST00000606307 135 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 AC242628.1-201ENST00000606810 391 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms