Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AP000942.3-201ENST00000603702 160 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AC004492.1-201ENST00000607036 742 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AL355802.3-201ENST00000607571 545 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AL355472.4-201ENST00000610233 626 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AC123767.1-202ENST00000620407 817 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RNA5SP327-201ENST00000362494 101 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 RNU6-655P-201ENST00000362858 107 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 RNU6-1284P-201ENST00000363701 100 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 RNU6-944P-201ENST00000364023 107 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 Y_RNA.255-201ENST00000364581 97 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 SNORA29-201ENST00000384183 140 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 MIR29B2-201ENST00000385055 81 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 MIR513A1-201ENST00000385138 129 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 FGF7P8-201ENST00000402994 292 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 OR6C66P-201ENST00000414917 930 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AL669831.1-202ENST00000428504 417 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 CBX3P6-201ENST00000430257 527 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC005094.1-201ENST00000440420 368 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC003071.1-201ENST00000451219 789 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 DUXAP8-207ENST00000456786 622 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 RNU1-131P-201ENST00000458943 161 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 MED28P2-201ENST00000475771 317 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC108729.1-201ENST00000487812 947 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC079140.2-201ENST00000506193 142 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 SNORA3.4-201ENST00000515969 96 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC022784.5-201ENST00000522241 437 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 CR383656.8-201ENST00000549046 145 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.62□□□□□ -2.31
LIMD2Q9BT23 VN1R83P-201ENST00000595685 445 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 NIFKP6-201ENST00000598115 845 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC012065.4-201ENST00000602445 679 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC004987.4-201ENST00000603383 338 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC093788.1-201ENST00000609356 927 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC004908.3-201ENST00000610248 625 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC012676.2-201ENST00000619258 186 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC068205.3-201ENST00000636385 468 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 AC233981.2-201ENST00000611524 1614 ntBASIC0.62□□□□□ -2.31
LIMD2Q9BT23 RNU6-23P-201ENST00000363283 107 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RNU1-22P-201ENST00000363334 158 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RNU6-1210P-201ENST00000363775 107 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RNU6-609P-201ENST00000365459 107 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RNU6-744P-201ENST00000365557 107 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RNU6-1316P-201ENST00000384242 108 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RNU6-622P-201ENST00000384272 103 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RNU6-160P-201ENST00000384591 107 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AL161935.2-201ENST00000414627 60 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AP1B1P2-201ENST00000416196 106 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AC138623.1-201ENST00000418060 216 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 FTH1P12-201ENST00000432137 551 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AL022238.1-201ENST00000442557 355 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 MTND2P4-201ENST00000445034 1004 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RNU7-59P-201ENST00000459101 61 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RPL30P6-201ENST00000475925 342 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 RNU6-143P-201ENST00000516942 93 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AP006587.4-201ENST00000526053 529 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 VN1R80P-201ENST00000597126 338 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 BNIP3P9-201ENST00000603714 553 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AP000860.1-201ENST00000605250 559 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AC009269.6-201ENST00000621778 588 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AC022513.1-201ENST00000624512 117 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
LIMD2Q9BT23 ICE2P2-201ENST00000483823 2787 ntBASIC0.61□□□□□ -2.31
LIMD2Q9BT23 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LIMD2Q9BT23 RNU6-26P-201ENST00000383985 107 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 RNU6-166P-201ENST00000384371 107 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 RNU6-1222P-201ENST00000384615 107 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 RNA5SP213-201ENST00000391031 106 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 RNU6-817P-201ENST00000391083 104 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 SNORA17.3-201ENST00000391159 129 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.6□□□□□ -2.31
LIMD2Q9BT23 BTF3P4-201ENST00000418852 495 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AC013410.2-201ENST00000422627 201 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AL591704.1-201ENST00000432574 275 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AL078601.1-201ENST00000444542 271 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 GDI2P2-201ENST00000445131 608 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 PRPS1P1-201ENST00000445305 876 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LIMD2Q9BT23 RPL23AP35-201ENST00000451906 501 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 OR2AQ1P-201ENST00000451972 200 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.6□□□□□ -2.31
LIMD2Q9BT23 RPL31P3-201ENST00000458430 332 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms