Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.04□□□□□ -2.08
CITED1Q99966 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.04□□□□□ -2.08
CITED1Q99966 PSPHP1-201ENST00000450062 261 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AC022364.2-201ENST00000457963 554 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 RNU6-956P-201ENST00000458868 103 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 RNA5SP233-201ENST00000459153 113 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AC003982.1-202ENST00000469928 248 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 MED28P2-201ENST00000475771 317 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AC117522.2-201ENST00000510049 657 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.04□□□□□ -2.08
CITED1Q99966 AP004607.1-201ENST00000524456 203 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AP003072.2-201ENST00000527756 676 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AP000889.2-201ENST00000532684 490 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.04□□□□□ -2.08
CITED1Q99966 MIR4529-201ENST00000578110 78 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 MIR4769-201ENST00000584126 77 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AC007229.1-201ENST00000590455 412 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AC007621.1-201ENST00000604544 437 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.04□□□□□ -2.08
CITED1Q99966 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CITED1Q99966 AC006566.1-201ENST00000608943 513 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AC010378.1-201ENST00000619270 362 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 AL162373.1-201ENST00000620433 407 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 Z69908.1-201ENST00000622603 247 ntBASIC2.04□□□□□ -2.08
CITED1Q99966 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.04□□□□□ -2.08
CITED1Q99966 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CITED1Q99966 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.03□□□□□ -2.08
CITED1Q99966 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
CITED1Q99966 SNORD62.1-201ENST00000362541 86 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 RNU6-371P-201ENST00000364283 108 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 RNU6-74P-201ENST00000384235 107 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 RNU6-72P-201ENST00000384285 79 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 MIR454-201ENST00000390180 115 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 RNA5SP425-201ENST00000410336 112 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 RNU4-53P-201ENST00000410828 140 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.03□□□□□ -2.08
CITED1Q99966 AL031779.1-201ENST00000415663 330 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AL135786.1-201ENST00000415892 214 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 EDDM3CP-201ENST00000415977 425 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 RPLP0P7-201ENST00000416050 667 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.03□□□□□ -2.08
CITED1Q99966 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.03□□□□□ -2.08
CITED1Q99966 MTND2P4-201ENST00000445034 1004 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.03□□□□□ -2.08
CITED1Q99966 AC006026.2-201ENST00000457376 180 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 RNU7-182P-201ENST00000459009 62 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 RPS29P21-201ENST00000496272 170 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.03□□□□□ -2.08
CITED1Q99966 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.03□□□□□ -2.08
CITED1Q99966 MTCO3P28-201ENST00000513351 515 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 SNORA48.11-201ENST00000517015 89 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CITED1Q99966 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.03□□□□□ -2.08
CITED1Q99966 MIR3913-1-201ENST00000577744 102 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AL158827.2-201ENST00000602494 330 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AC025811.1-201ENST00000604312 472 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AC087752.4-201ENST00000605911 462 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 U4.3-201ENST00000621047 82 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AL031601.2-202ENST00000622650 282 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 AL691447.3-201ENST00000635020 330 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 MIR3529-201ENST00000637713 78 ntBASIC2.03□□□□□ -2.08
CITED1Q99966 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CITED1Q99966 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CITED1Q99966 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.02□□□□□ -2.09
CITED1Q99966 SNORD114-19-201ENST00000363072 75 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 RNU6-181P-201ENST00000363225 107 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 RNU6-282P-201ENST00000365357 103 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CITED1Q99966 MIR27B-201ENST00000385129 97 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 SNORA46.1-201ENST00000391069 153 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 U3.40-201ENST00000408706 208 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.02□□□□□ -2.09
CITED1Q99966 EEF1A1P40-201ENST00000412883 573 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.02□□□□□ -2.09
CITED1Q99966 Z98742.3-201ENST00000418637 326 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AL365400.1-201ENST00000431854 640 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AC009238.1-201ENST00000442165 424 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.02□□□□□ -2.09
CITED1Q99966 USP9YP29-201ENST00000445112 563 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AC009237.6-201ENST00000446969 424 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.02□□□□□ -2.09
CITED1Q99966 Y_RNA.638-201ENST00000459374 113 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AC140059.1-201ENST00000489238 361 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.02□□□□□ -2.09
CITED1Q99966 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.02□□□□□ -2.09
CITED1Q99966 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.02□□□□□ -2.09
CITED1Q99966 RNA5SP320-201ENST00000516263 124 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 RNU6-445P-201ENST00000516949 107 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 RNA5SP503-201ENST00000517047 117 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.02□□□□□ -2.09
CITED1Q99966 IGKV3-31-201ENST00000523109 329 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.02□□□□□ -2.09
CITED1Q99966 AC119751.7-201ENST00000600494 245 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.02□□□□□ -2.09
CITED1Q99966 AC068790.2-201ENST00000602601 557 ntBASIC2.02□□□□□ -2.09
CITED1Q99966 AL109918.3-201ENST00000603072 338 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms