Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DUSP9Q99956 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DUSP9Q99956 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
DUSP9Q99956 Y_RNA.27-201ENST00000362540 103 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 Y_RNA.188-201ENST00000363952 111 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 RNA5SP130-201ENST00000364431 114 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 AL356968.1-201ENST00000416622 474 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.35□□□□□ -1.71
DUSP9Q99956 RPL23AP95-201ENST00000426806 265 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 AC005300.1-201ENST00000428401 373 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 AP000907.1-201ENST00000428428 510 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.35□□□□□ -1.71
DUSP9Q99956 AC104564.1-201ENST00000493028 407 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.35□□□□□ -1.71
DUSP9Q99956 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.35□□□□□ -1.71
DUSP9Q99956 SNORA25.11-201ENST00000515935 105 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.35□□□□□ -1.71
DUSP9Q99956 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.35□□□□□ -1.71
DUSP9Q99956 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.35□□□□□ -1.71
DUSP9Q99956 RPL23AP88-201ENST00000605759 454 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 RMST_6.1-201ENST00000611980 203 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.35□□□□□ -1.71
DUSP9Q99956 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.35□□□□□ -1.71
DUSP9Q99956 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DUSP9Q99956 AL353743.1-202ENST00000431724 1695 ntBASIC4.35□□□□□ -1.71
DUSP9Q99956 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
DUSP9Q99956 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
DUSP9Q99956 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.34□□□□□ -1.71
DUSP9Q99956 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DUSP9Q99956 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
DUSP9Q99956 SPRR2C-201ENST00000290702 219 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 SNORD115-32-201ENST00000364079 82 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 SNORD32A-201ENST00000364805 84 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 Y_RNA.358-201ENST00000365491 99 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 Y_RNA.471-201ENST00000384312 102 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 RNU6-843P-201ENST00000384454 104 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 RPL21P40-201ENST00000428586 483 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.34□□□□□ -1.71
DUSP9Q99956 RNU7-170P-201ENST00000459303 61 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 RNU7-87P-201ENST00000459343 62 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 RPL23AP75-201ENST00000491601 451 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 ANXA2P1-201ENST00000505539 926 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.34□□□□□ -1.71
DUSP9Q99956 BTF3L4P4-201ENST00000506381 449 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.34□□□□□ -1.71
DUSP9Q99956 RNU5F-8P-201ENST00000515941 111 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 SNORA31.23-201ENST00000517219 133 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.34□□□□□ -1.71
DUSP9Q99956 CKS1BP7-201ENST00000522230 235 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 MRPS36P4-201ENST00000534436 298 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 AL442163.3-201ENST00000554110 156 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.34□□□□□ -1.71
DUSP9Q99956 HMGN2P15-201ENST00000585707 270 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.34□□□□□ -1.71
DUSP9Q99956 RAC1P9-201ENST00000604990 392 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 AC107871.2-201ENST00000612894 502 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 AC091903.1-201ENST00000624322 454 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 U6.104-201ENST00000637979 90 ntBASIC4.34□□□□□ -1.71
DUSP9Q99956 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.34□□□□□ -1.71
DUSP9Q99956 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DUSP9Q99956 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.34□□□□□ -1.72
DUSP9Q99956 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.34□□□□□ -1.72
DUSP9Q99956 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.34□□□□□ -1.72
DUSP9Q99956 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
DUSP9Q99956 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
DUSP9Q99956 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
DUSP9Q99956 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
DUSP9Q99956 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DUSP9Q99956 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DUSP9Q99956 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.33□□□□□ -1.72
DUSP9Q99956 AP000560.1-201ENST00000624150 1937 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 RNU1-140P-201ENST00000365040 165 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 RNU6-487P-201ENST00000365430 104 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 CBX3P6-201ENST00000430257 527 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 USP9YP16-201ENST00000430287 407 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 AC108059.2-201ENST00000434626 151 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 AC009296.1-201ENST00000443146 155 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.33□□□□□ -1.72
DUSP9Q99956 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.33□□□□□ -1.72
DUSP9Q99956 USP9YP23-201ENST00000455085 407 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.33□□□□□ -1.72
DUSP9Q99956 Y_RNA.668-201ENST00000516233 93 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 RNY3P15-201ENST00000516297 97 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DUSP9Q99956 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.33□□□□□ -1.72
DUSP9Q99956 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.33□□□□□ -1.72
DUSP9Q99956 AC091167.4-201ENST00000605079 184 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 AL591424.2-201ENST00000617023 128 ntBASIC4.33□□□□□ -1.72
DUSP9Q99956 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.33□□□□□ -1.72
DUSP9Q99956 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.33□□□□□ -1.72
DUSP9Q99956 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DUSP9Q99956 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DUSP9Q99956 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
DUSP9Q99956 AL353746.1-201ENST00000566293 6881 ntBASIC4.32□□□□□ -1.72
DUSP9Q99956 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
DUSP9Q99956 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.32□□□□□ -1.72
DUSP9Q99956 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DUSP9Q99956 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms