Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RNU6-314P-201ENST00000516574 104 ntBASIC2.53□□□□□ -2
CPNE1Q99829 RPL7P20-201ENST00000520308 745 ntBASIC2.53□□□□□ -2
CPNE1Q99829 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.53□□□□□ -2
CPNE1Q99829 AC027807.1-201ENST00000559921 996 ntBASIC2.53□□□□□ -2
CPNE1Q99829 MIR5583-1-201ENST00000580941 59 ntBASIC2.53□□□□□ -2
CPNE1Q99829 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.53□□□□□ -2
CPNE1Q99829 AC008121.1-201ENST00000603244 268 ntBASIC2.53□□□□□ -2
CPNE1Q99829 AC092954.2-201ENST00000609103 430 ntBASIC2.53□□□□□ -2
CPNE1Q99829 Z82243.1-201ENST00000609432 473 ntBASIC2.53□□□□□ -2
CPNE1Q99829 U2.17-201ENST00000611454 95 ntBASIC2.53□□□□□ -2
CPNE1Q99829 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.53□□□□□ -2
CPNE1Q99829 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.53□□□□□ -2
CPNE1Q99829 HAUS6P2-201ENST00000433254 2404 ntBASIC2.53□□□□□ -2
CPNE1Q99829 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.52□□□□□ -2.01
CPNE1Q99829 Y_RNA.3-201ENST00000362331 103 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 RNU6-486P-201ENST00000363116 107 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.52□□□□□ -2.01
CPNE1Q99829 RNU6-843P-201ENST00000384454 104 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 MIR181A1-201ENST00000385026 110 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.52□□□□□ -2.01
CPNE1Q99829 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.52□□□□□ -2.01
CPNE1Q99829 AL445687.1-201ENST00000439946 251 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.52□□□□□ -2.01
CPNE1Q99829 RNU7-167P-201ENST00000459160 62 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 RPL36AP48-201ENST00000485521 314 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.52□□□□□ -2.01
CPNE1Q99829 RNA5SP401-201ENST00000515920 127 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 SNORA43.2-201ENST00000516652 128 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 RNU6-835P-201ENST00000516974 104 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 SCARNA3-201ENST00000517097 143 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.52□□□□□ -2.01
CPNE1Q99829 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.52□□□□□ -2.01
CPNE1Q99829 MIR3199-1-201ENST00000582434 88 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.52□□□□□ -2.01
CPNE1Q99829 MIR4424-201ENST00000585257 86 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.52□□□□□ -2.01
CPNE1Q99829 AL356280.1-201ENST00000603614 379 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 RMST_7.1-201ENST00000621935 268 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 Z69720.2-201ENST00000624755 279 ntBASIC2.52□□□□□ -2.01
CPNE1Q99829 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
CPNE1Q99829 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
CPNE1Q99829 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CPNE1Q99829 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.51□□□□□ -2.01
CPNE1Q99829 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CPNE1Q99829 MTND4P27-201ENST00000450813 1354 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.51□□□□□ -2.01
CPNE1Q99829 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 RNA5SP456-201ENST00000364002 114 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 RNU5E-7P-201ENST00000365290 117 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 U8.8-201ENST00000365399 135 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 RNU6-487P-201ENST00000365430 104 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 SNORD116-20-201ENST00000384529 92 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 RPL17P50-201ENST00000396131 546 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 OR9R1P-201ENST00000412200 877 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.51□□□□□ -2.01
CPNE1Q99829 AL096701.2-201ENST00000416920 238 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 HMGB1P31-201ENST00000437242 427 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.51□□□□□ -2.01
CPNE1Q99829 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.51□□□□□ -2.01
CPNE1Q99829 snoU13.22-201ENST00000459428 104 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.51□□□□□ -2.01
CPNE1Q99829 AC023141.11-201ENST00000508864 202 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 RNU4-29P-201ENST00000515943 174 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 AC016957.1-201ENST00000534895 309 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.51□□□□□ -2.01
CPNE1Q99829 AC096772.1-201ENST00000609146 564 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 AC244517.12-201ENST00000623581 663 ntBASIC2.51□□□□□ -2.01
CPNE1Q99829 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.51□□□□□ -2.01
CPNE1Q99829 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CPNE1Q99829 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CPNE1Q99829 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CPNE1Q99829 Y_RNA.372-201ENST00000365599 102 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 RNU6-780P-201ENST00000391030 104 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 AL590002.1-201ENST00000406554 418 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 SNORA11-201ENST00000408789 128 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 RNU6-648P-201ENST00000410190 107 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 BX276092.3-201ENST00000424182 230 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.5□□□□□ -2.01
CPNE1Q99829 SEPT14P3-201ENST00000439401 183 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 AL732372.2-207ENST00000445840 183 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 SEPT14P2-201ENST00000453405 183 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 RPL7P43-201ENST00000478876 753 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 AC018437.1-201ENST00000492214 406 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 SEPT14P4-201ENST00000513445 186 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 RNU6-1281P-201ENST00000516223 105 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 SNORA25.17-201ENST00000517184 124 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 FO082796.1-201ENST00000523795 183 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CPNE1Q99829 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.5□□□□□ -2.01
CPNE1Q99829 ZNF519P2-201ENST00000557032 169 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.5□□□□□ -2.01
CPNE1Q99829 ELOCP29-201ENST00000588193 334 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 RPS15AP11-201ENST00000594193 385 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 AC025165.5-201ENST00000602802 578 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 AL162413.1-201ENST00000603198 110 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.5□□□□□ -2.01
CPNE1Q99829 AL021997.1-201ENST00000605757 193 ntBASIC2.5□□□□□ -2.01
CPNE1Q99829 AF250324.2-201ENST00000608299 610 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms