Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 FABP5P14-201ENST00000437273 393 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.11□□□□□ -1.91
MEIS3Q99687 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.11□□□□□ -1.91
MEIS3Q99687 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MEIS3Q99687 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.11□□□□□ -1.91
MEIS3Q99687 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.11□□□□□ -1.91
MEIS3Q99687 RNU6-189P-201ENST00000516120 101 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.11□□□□□ -1.91
MEIS3Q99687 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.11□□□□□ -1.91
MEIS3Q99687 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.11□□□□□ -1.91
MEIS3Q99687 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.11□□□□□ -1.91
MEIS3Q99687 MIR3671-201ENST00000580455 88 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 AP001486.3-201ENST00000615334 372 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.11□□□□□ -1.91
MEIS3Q99687 AC121333.1-201ENST00000567488 2709 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 HSPA8P4-201ENST00000511877 1920 ntBASIC3.11□□□□□ -1.91
MEIS3Q99687 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MEIS3Q99687 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.1□□□□□ -1.91
MEIS3Q99687 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.1□□□□□ -1.91
MEIS3Q99687 Y_RNA.144-201ENST00000363521 113 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 SNORD113-7-201ENST00000363762 77 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 RNU6-310P-201ENST00000384655 107 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 RPS4XP7-201ENST00000406274 780 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 RNU4-65P-201ENST00000410473 140 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 RNA5SP111-201ENST00000411386 101 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 MTCO1P39-201ENST00000426148 480 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MEIS3Q99687 RPL35AP22-201ENST00000436855 335 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 MTCO3P45-201ENST00000443036 613 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.1□□□□□ -1.91
MEIS3Q99687 RNU7-152P-201ENST00000458982 64 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 SNORD97-201ENST00000459187 142 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 AC117503.1-201ENST00000472241 394 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 UBE2DNL-203ENST00000474922 222 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 AC108860.1-201ENST00000484521 383 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MEIS3Q99687 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.1□□□□□ -1.91
MEIS3Q99687 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.1□□□□□ -1.91
MEIS3Q99687 RNU6-120P-201ENST00000516077 103 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 Y_RNA.689-201ENST00000516589 107 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 RNU6-685P-201ENST00000517088 95 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.1□□□□□ -1.91
MEIS3Q99687 AC018630.1-201ENST00000541376 925 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.1□□□□□ -1.91
MEIS3Q99687 AC012409.4-201ENST00000612923 249 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 SNHG22-203ENST00000617833 660 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 U4.3-201ENST00000621047 82 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 ZNF519P1-201ENST00000449011 1626 ntBASIC3.1□□□□□ -1.91
MEIS3Q99687 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MEIS3Q99687 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
MEIS3Q99687 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
MEIS3Q99687 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.09□□□□□ -1.91
MEIS3Q99687 RNU6-288P-201ENST00000363690 104 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 Y_RNA.187-201ENST00000363918 113 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 RNU6-1303P-201ENST00000364841 107 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 SNORA23-201ENST00000365128 182 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 RNU6-715P-201ENST00000365204 103 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 SNORD116-11-201ENST00000383882 92 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 Y_RNA.395-201ENST00000383945 109 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 SNORA67.4-201ENST00000384688 142 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 EIF4E2P1-201ENST00000393781 255 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 RNU4-46P-201ENST00000410818 138 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.09□□□□□ -1.91
MEIS3Q99687 AC079780.1-201ENST00000428259 207 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 RPL21P112-201ENST00000434403 463 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 AC004866.2-201ENST00000438285 481 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 MTND1P17-201ENST00000448961 204 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 snoU109.4-201ENST00000458953 143 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 SNORA59A-201ENST00000459326 152 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 AC009901.1-201ENST00000506703 541 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.09□□□□□ -1.91
MEIS3Q99687 MTCYBP40-201ENST00000509390 1135 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.09□□□□□ -1.91
MEIS3Q99687 AP006587.4-201ENST00000526053 529 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 RANP3-201ENST00000530970 276 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
MEIS3Q99687 AC005951.2-201ENST00000576282 495 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 AC100830.2-201ENST00000581636 240 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 MIR5692C1-201ENST00000585309 91 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 AC007938.3-201ENST00000604965 623 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 U73479.1-201ENST00000618062 168 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 AC103705.1-201ENST00000619013 241 ntBASIC3.09□□□□□ -1.91
MEIS3Q99687 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
MEIS3Q99687 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.08□□□□□ -1.92
MEIS3Q99687 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
MEIS3Q99687 RNU6-1249P-201ENST00000363237 111 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 RNU6-1309P-201ENST00000363305 108 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 Y_RNA.145-201ENST00000363527 102 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 Y_RNA.148-201ENST00000363557 117 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 RNU6-1284P-201ENST00000363701 100 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MEIS3Q99687 RNU6-601P-201ENST00000384540 107 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 SNORA48.8-201ENST00000391324 134 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 RNU6-712P-201ENST00000410558 100 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.08□□□□□ -1.92
MEIS3Q99687 ARL5AP1-201ENST00000418991 388 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.08□□□□□ -1.92
MEIS3Q99687 AL137792.2-201ENST00000443484 235 ntBASIC3.08□□□□□ -1.92
MEIS3Q99687 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.08□□□□□ -1.92
MEIS3Q99687 MTATP8P1-201ENST00000467115 207 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms