Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNU6-927P-201ENST00000516199 100 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 RNU6-566P-201ENST00000516790 107 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 RNU6-273P-201ENST00000516937 96 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 RN7SKP57-201ENST00000517248 293 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.94□□□□□ -1.94
PKP4Q99569 AP003072.1-201ENST00000531740 145 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.94□□□□□ -1.94
PKP4Q99569 AC090115.3-201ENST00000553218 849 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.94□□□□□ -1.94
PKP4Q99569 DPPA3P3-201ENST00000603842 430 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 APOOP1-201ENST00000604695 592 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 AL160281.1-201ENST00000605307 311 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 FTX_3.1-201ENST00000610451 147 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 DUSP12P1-201ENST00000612874 516 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 MTND5P42-201ENST00000637720 498 ntBASIC2.94□□□□□ -1.94
PKP4Q99569 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PKP4Q99569 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.94□□□□□ -1.94
PKP4Q99569 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PKP4Q99569 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PKP4Q99569 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.93□□□□□ -1.94
PKP4Q99569 Y_RNA.138-201ENST00000363462 102 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 Y_RNA.162-201ENST00000363683 102 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 Y_RNA.212-201ENST00000364177 102 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 SNORA71.1-201ENST00000364523 117 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 RNU6-715P-201ENST00000365204 103 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 RNA5SP274-201ENST00000410484 108 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.93□□□□□ -1.94
PKP4Q99569 AC080125.1-201ENST00000414888 684 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AC092809.3-201ENST00000415453 231 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AL139396.1-201ENST00000421137 167 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.93□□□□□ -1.94
PKP4Q99569 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.93□□□□□ -1.94
PKP4Q99569 AL353729.1-201ENST00000425044 720 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AC098614.2-201ENST00000426040 255 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AL358075.3-201ENST00000426289 226 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 HMGB1P27-201ENST00000431429 603 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 RPS3AP52-201ENST00000435639 297 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.93□□□□□ -1.94
PKP4Q99569 UQCRHP3-201ENST00000451503 251 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 RNU7-167P-201ENST00000459160 62 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 RPL7P43-201ENST00000478876 753 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 SEM1P1-201ENST00000506694 209 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AC113155.1-201ENST00000511141 769 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.93□□□□□ -1.94
PKP4Q99569 RNU6-1170P-201ENST00000515974 106 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 RN7SKP272-201ENST00000516988 232 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.93□□□□□ -1.94
PKP4Q99569 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.93□□□□□ -1.94
PKP4Q99569 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.93□□□□□ -1.94
PKP4Q99569 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.93□□□□□ -1.94
PKP4Q99569 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PKP4Q99569 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.93□□□□□ -1.94
PKP4Q99569 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.93□□□□□ -1.94
PKP4Q99569 AC093249.1-201ENST00000567049 203 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 MIR3672-201ENST00000584290 82 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AC090971.5-201ENST00000621102 293 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 AC091953.5-201ENST00000622919 233 ntBASIC2.93□□□□□ -1.94
PKP4Q99569 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.93□□□□□ -1.94
PKP4Q99569 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PKP4Q99569 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PKP4Q99569 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PKP4Q99569 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PKP4Q99569 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.93□□□□□ -1.94
PKP4Q99569 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.92□□□□□ -1.94
PKP4Q99569 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
PKP4Q99569 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
PKP4Q99569 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.92□□□□□ -1.94
PKP4Q99569 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PKP4Q99569 FTLP6-201ENST00000355274 422 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 RNU6-288P-201ENST00000363690 104 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 RN7SKP158-201ENST00000410453 326 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 RNA5SP492-201ENST00000411330 114 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 RPL37P10-201ENST00000412884 288 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.92□□□□□ -1.94
PKP4Q99569 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.92□□□□□ -1.94
PKP4Q99569 AC117440.1-201ENST00000474107 571 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 RN7SL283P-201ENST00000489055 303 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 RNU2-69P-201ENST00000516061 100 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 Y_RNA.718-201ENST00000517110 102 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 RNA5SP454-201ENST00000517231 127 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 AC009812.2-201ENST00000517657 457 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 AC022634.1-201ENST00000520765 532 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.92□□□□□ -1.94
PKP4Q99569 MTCO3P23-201ENST00000561363 289 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 MTCO3P13-201ENST00000577757 781 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 MIR4790-201ENST00000577799 79 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 MIR3941-201ENST00000582572 103 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 AC023043.2-201ENST00000589678 1026 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 ATP1B3P1-201ENST00000605365 821 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 AC022893.3-201ENST00000607665 437 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms