Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC018865.2-201ENST00000423631 129 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 AL133396.1-201ENST00000432048 687 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 AC008571.1-201ENST00000467232 300 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 AC093663.1-201ENST00000497190 394 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 RNU6-699P-201ENST00000517081 110 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 AC022149.2-201ENST00000621061 203 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 Z69720.2-201ENST00000624755 279 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX18Q96RF0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX18Q96RF0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX18Q96RF0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX18Q96RF0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNX18Q96RF0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 AL161912.2-201ENST00000565707 3007 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNX18Q96RF0 MIR208A-201ENST00000362287 71 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 RNU6-827P-201ENST00000365553 106 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 SNORA11.1-201ENST00000408133 129 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 RPS29P4-201ENST00000414733 161 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 AC243428.1-201ENST00000421099 264 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 HMGN1P18-201ENST00000457642 277 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 RPL23AP45-201ENST00000476406 468 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 RNA5SP385-201ENST00000515947 110 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 RNU1-103P-201ENST00000516502 125 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 RNU6-1046P-201ENST00000516538 107 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 RNU6-928P-201ENST00000516876 104 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 RNU6-1137P-201ENST00000517073 99 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 MIR4782-201ENST00000577987 79 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX18Q96RF0 AC008121.1-201ENST00000603244 268 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 AC136443.5-201ENST00000603741 370 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 AL355598.1-201ENST00000604169 202 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 MIR3976-201ENST00000606807 139 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 AL591516.1-201ENST00000611326 274 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 AC019176.2-201ENST00000611579 315 ntBASIC3.2□□□□□ -1.9
SNX18Q96RF0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNX18Q96RF0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNX18Q96RF0 AF117829.1-206ENST00000621883 3802 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 AL356274.2-201ENST00000624379 3752 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX18Q96RF0 RNU6-490P-201ENST00000362985 107 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 SNORD56.3-201ENST00000363507 71 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 Y_RNA.252-201ENST00000364556 101 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 RNU6-1317P-201ENST00000364582 104 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 RNU6-933P-201ENST00000384424 107 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 RNU6-658P-201ENST00000384606 106 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 RPS4XP3-201ENST00000398541 413 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX18Q96RF0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 HMGN2P30-201ENST00000423237 256 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 HMGN2P31-201ENST00000432430 273 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 PRSS3P4-201ENST00000453323 162 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 snoU109.2-201ENST00000459316 135 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 AC006445.2-201ENST00000510061 472 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 AC104619.4-201ENST00000510773 249 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 RNU6-307P-201ENST00000516743 106 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 RNU6-703P-201ENST00000516946 107 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 AC026333.2-201ENST00000542164 106 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 H3F3AP1-201ENST00000559984 334 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 AC006157.1-201ENST00000611750 366 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 AC091925.1-201ENST00000623204 462 ntBASIC3.19□□□□□ -1.9
SNX18Q96RF0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.19□□□□□ -1.9
SNX18Q96RF0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms