Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC009977.1-201ENST00000586015 570 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC211469.2-201ENST00000605461 205 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC112220.3-201ENST00000605502 502 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 uc_338.15-201ENST00000615470 191 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC099654.5-201ENST00000636479 350 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC100821.1-201ENST00000523153 2479 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AL391987.6-201ENST00000305671 199 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 MIR515-2-201ENST00000384883 83 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 MIR515-1-201ENST00000384884 83 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 MIR548B-201ENST00000385247 97 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AL359634.1-202ENST00000404721 284 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 RN7SKP61-201ENST00000410642 295 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 BX664727.1-201ENST00000416024 466 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 PIGFP2-201ENST00000421400 651 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AC104651.1-201ENST00000427559 735 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AL592045.1-201ENST00000429867 352 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AL121890.1-201ENST00000435457 205 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 SEPT14P24-201ENST00000447236 180 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AC130509.1-201ENST00000464158 433 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 RPF2P2-201ENST00000504693 896 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 RN7SKP256-201ENST00000517201 314 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 SLC2A13P1-201ENST00000531560 322 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AC093012.1-202ENST00000549403 582 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AL133153.1-201ENST00000557756 303 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AL731537.2-201ENST00000561565 951 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AC136932.1-201ENST00000574771 208 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 MIR4661-201ENST00000582720 75 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AC078795.2-201ENST00000602835 1252 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 BX284668.6-201ENST00000606899 438 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AL136313.1-201ENST00000624804 202 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
AP1S3Q96PC3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AL161781.1-201ENST00000354277 403 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 SNORA25-201ENST00000384384 134 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 MIR1261-201ENST00000408659 82 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AL589872.1-201ENST00000426602 288 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 FO393414.1-201ENST00000428697 1184 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 KATNBL1P3-201ENST00000443475 909 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 RPL18AP17-201ENST00000455326 198 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AL512310.8-201ENST00000550183 120 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AC104072.1-201ENST00000568817 668 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AC008088.1-201ENST00000580993 280 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AC005786.1-201ENST00000588553 154 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 MZT1P2-201ENST00000604387 248 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 MIR8065-201ENST00000620577 100 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 AC120349.3-201ENST00000624377 529 ntBASIC0.62□□□□□ -2.31
AP1S3Q96PC3 RNU6-160P-201ENST00000384591 107 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 MIR532-201ENST00000385025 91 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 RNU6-360P-201ENST00000390944 104 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AC016831.2-201ENST00000417179 352 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 DPRXP1-201ENST00000426312 460 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AL365400.1-201ENST00000431854 640 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.61□□□□□ -2.31
AP1S3Q96PC3 BTF3P15-201ENST00000455606 336 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.61□□□□□ -2.31
AP1S3Q96PC3 RPL37P6-201ENST00000460682 294 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AC108210.2-201ENST00000503681 201 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.61□□□□□ -2.31
AP1S3Q96PC3 SNORA3.4-201ENST00000515969 96 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 SNORA31.19-201ENST00000517079 126 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.61□□□□□ -2.31
AP1S3Q96PC3 MTCYBP33-201ENST00000575007 1130 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AC126365.2-201ENST00000580630 379 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AL445435.1-201ENST00000604232 665 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 FAM71BP1-201ENST00000604431 523 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AC018926.1-201ENST00000616335 435 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AC123767.1-202ENST00000620407 817 ntBASIC0.61□□□□□ -2.31
AP1S3Q96PC3 AC093648.1-201ENST00000623546 606 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms