Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL365496.1-201ENST00000426885 215 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.2□□□□□ -2.44
CFAP54Q96N23 AC012435.1-202ENST00000568772 240 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 AL513534.2-201ENST00000603836 250 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 AC104465.1-201ENST00000611365 139 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 AP003072.4-201ENST00000624580 310 ntBASIC-0.2□□□□□ -2.44
CFAP54Q96N23 AL034374.1-201ENST00000406329 351 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.21□□□□□ -2.44
CFAP54Q96N23 SPINT5P-201ENST00000448174 155 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 RPL30P7-201ENST00000479312 323 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 HMGB1P35-201ENST00000503360 598 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 PDCD5P2-201ENST00000507570 312 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 AP003066.2-201ENST00000529375 555 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC-0.21□□□□□ -2.44
CFAP54Q96N23 MIR4496-201ENST00000635896 61 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 RNU6-748P-201ENST00000384648 107 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 RNA5SP219-201ENST00000390940 113 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC-0.21□□□□□ -2.44
CFAP54Q96N23 AC093534.1-201ENST00000504977 132 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.21□□□□□ -2.44
CFAP54Q96N23 HSPA8P13-201ENST00000523715 472 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 AP004371.1-201ENST00000525240 214 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC-0.21□□□□□ -2.44
CFAP54Q96N23 AC008088.1-201ENST00000580993 280 ntBASIC-0.21□□□□□ -2.44
CFAP54Q96N23 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 SNORD126-201ENST00000459475 77 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 RNU6-197P-201ENST00000516680 100 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 AL590229.1-201ENST00000603497 542 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 AC069304.2-201ENST00000605154 435 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 AC097065.2-201ENST00000608159 533 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 AC092106.3-201ENST00000611308 722 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 MIRLET7D-201ENST00000362263 87 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 RNFT1P2-201ENST00000443064 757 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 FCF1P6-201ENST00000456841 595 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.22□□□□□ -2.44
CFAP54Q96N23 RNA5SP227-201ENST00000516184 113 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.22□□□□□ -2.44
CFAP54Q96N23 AL049545.1-201ENST00000401856 572 ntBASIC-0.22□□□□□ -2.45
CFAP54Q96N23 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.22□□□□□ -2.45
CFAP54Q96N23 uc_338.36-201ENST00000622331 158 ntBASIC-0.22□□□□□ -2.45
CFAP54Q96N23 AC005832.2-201ENST00000538921 1430 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
CFAP54Q96N23 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.23□□□□□ -2.45
CFAP54Q96N23 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.23□□□□□ -2.45
CFAP54Q96N23 LARP1BP2-201ENST00000486594 519 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.23□□□□□ -2.45
CFAP54Q96N23 AC008759.3-201ENST00000613300 508 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 MIR548AZ-201ENST00000616567 95 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 AC132825.8-201ENST00000640783 297 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 SNORD89-201ENST00000390981 114 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 AL512844.2-201ENST00000433990 593 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
CFAP54Q96N23 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.23□□□□□ -2.45
CFAP54Q96N23 MTATP6P9-201ENST00000515039 680 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 RN7SKP277-201ENST00000516895 283 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC-0.23□□□□□ -2.45
CFAP54Q96N23 AC004852.3-201ENST00000614131 326 ntBASIC-0.23□□□□□ -2.45
CFAP54Q96N23 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
CFAP54Q96N23 AC099677.1-201ENST00000420575 175 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 MTND4P20-201ENST00000424125 869 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.24□□□□□ -2.45
CFAP54Q96N23 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.24□□□□□ -2.45
CFAP54Q96N23 MRPS36P4-201ENST00000534436 298 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 AL356432.3-201ENST00000568952 465 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 AC134026.1-201ENST00000623249 2239 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 RNA5SP327-201ENST00000362494 101 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 SNORD33-201ENST00000362761 85 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 AC013267.1-201ENST00000458227 267 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.24□□□□□ -2.45
CFAP54Q96N23 MIR3165-201ENST00000579874 75 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 MIR4441-201ENST00000582623 100 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.24□□□□□ -2.45
CFAP54Q96N23 Z98751.3-201ENST00000604447 521 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 SNORA63D-201ENST00000364359 132 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
CFAP54Q96N23 RNU6-929P-201ENST00000384429 107 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 RN7SKP266-201ENST00000410232 287 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 RN7SKP5-201ENST00000517045 272 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 MTCYBP22-201ENST00000603788 447 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 AL357312.1-201ENST00000603879 298 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 AC010738.1-201ENST00000604970 987 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.24□□□□□ -2.45
CFAP54Q96N23 MIR7157-201ENST00000635801 60 ntBASIC-0.24□□□□□ -2.45
CFAP54Q96N23 RNY4P27-201ENST00000363341 96 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 RNU6-152P-201ENST00000384037 107 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 MTCO2P12-201ENST00000427426 682 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms