Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.36□□□□□ -1.87
CCDC17Q96LX7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC17Q96LX7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RNU6-1188P-201ENST00000363795 107 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RNU6-266P-201ENST00000364225 107 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 SNORA48.8-201ENST00000391324 134 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AL360182.1-201ENST00000397433 468 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RN7SKP58-201ENST00000411010 305 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 MTCO2P27-201ENST00000420740 428 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RPL27AP8-201ENST00000424277 446 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RPL21P66-201ENST00000426566 466 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 BRK1P2-201ENST00000442875 223 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 MTCO3P10-201ENST00000455912 772 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RNU7-152P-201ENST00000458982 64 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AC092436.3-201ENST00000511788 257 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RPL39P5-202ENST00000512505 151 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RNU1-86P-201ENST00000516108 154 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RNU1-107P-201ENST00000516617 154 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RNU6-1213P-201ENST00000517075 94 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 MIR1273C-201ENST00000578669 77 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 MIR3690-201ENST00000580266 75 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 MIR5692A1-201ENST00000580523 69 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 MIR3171-201ENST00000584270 74 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AC006023.1-201ENST00000603944 259 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AC080078.3-201ENST00000605407 463 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AL080274.1-201ENST00000605565 220 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AC090971.5-201ENST00000621102 293 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AL031601.2-202ENST00000622650 282 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 AC134503.1-201ENST00000633048 54 ntBASIC3.35□□□□□ -1.87
CCDC17Q96LX7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
CCDC17Q96LX7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AC009487.2-201ENST00000420969 6821 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 RNU6-600P-201ENST00000362524 99 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 Y_RNA.162-201ENST00000363683 102 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 Y_RNA.473-201ENST00000384333 102 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 Y_RNA.482-201ENST00000384377 111 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 MTCYBP4-201ENST00000401524 249 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 RNU6-607P-201ENST00000411283 108 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AL353621.1-201ENST00000418219 243 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AL139396.1-201ENST00000421137 167 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 FABP5P15-201ENST00000453566 214 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 Y_RNA.639-201ENST00000458981 102 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AP002884.2-201ENST00000471647 395 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 UBE2DNL-203ENST00000474922 222 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 ELOCP31-201ENST00000540463 467 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AC025423.5-201ENST00000550230 219 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 MIR3162-201ENST00000581818 82 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 MIR548AC-201ENST00000585049 88 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 RPL12P50-201ENST00000603116 116 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 SNRPGP17-201ENST00000603780 214 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AP002826.1-201ENST00000608835 315 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 AC006023.2-201ENST00000609916 167 ntBASIC3.34□□□□□ -1.87
CCDC17Q96LX7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC17Q96LX7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC17Q96LX7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
CCDC17Q96LX7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 RNU6-95P-201ENST00000384697 107 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 SNORA75.4-201ENST00000391278 119 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 RNA5SP184-201ENST00000411071 108 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 Z82205.1-201ENST00000428456 297 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 VDAC1P3-201ENST00000434069 851 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 AC130509.1-201ENST00000464158 433 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 RPS20P22-201ENST00000473700 357 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 AC079140.5-201ENST00000507882 310 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 AC093303.1-201ENST00000514549 295 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 AC245166.1-201ENST00000521012 253 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 TRAV37-201ENST00000553906 342 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 MIR4513-201ENST00000581077 86 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms