Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SNORD14B-201ENST00000364533 90 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 RNU6-384P-201ENST00000364900 104 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 Y_RNA.374-201ENST00000365606 101 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 RNU6-767P-201ENST00000384132 107 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 Y_RNA.530-201ENST00000384587 101 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 MIR10A-201ENST00000385043 110 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 RN7SKP123-201ENST00000410732 291 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 NDUFS5P4-201ENST00000412983 318 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX27Q96L92 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX27Q96L92 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX27Q96L92 USP9YP20-201ENST00000419224 558 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.39□□□□□ -1.87
SNX27Q96L92 MTND5P20-201ENST00000448677 143 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.39□□□□□ -1.87
SNX27Q96L92 AL031183.1-201ENST00000457667 207 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 AC087884.1-201ENST00000469738 328 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 AC011005.2-201ENST00000487324 359 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 AC008628.2-201ENST00000502605 298 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX27Q96L92 AC079140.5-201ENST00000507882 310 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX27Q96L92 AC008885.1-201ENST00000514930 301 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 RNU6-1053P-201ENST00000515930 101 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 SNORA19.2-201ENST00000516013 114 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 RNU6-1183P-201ENST00000517054 60 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 RNU6-711P-201ENST00000517255 106 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.39□□□□□ -1.87
SNX27Q96L92 AL645944.1-201ENST00000603857 493 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 AC004832.5-201ENST00000608677 401 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 RMST_4.1-201ENST00000616886 107 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 AC241585.2-209ENST00000638217 143 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 MIR622-201ENST00000638396 96 ntBASIC3.39□□□□□ -1.87
SNX27Q96L92 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SNX27Q96L92 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SNX27Q96L92 AC062016.1-201ENST00000355719 319 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 Y_RNA.116-201ENST00000363292 103 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 RNU6-867P-201ENST00000364956 107 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 Y_RNA.324-201ENST00000365165 102 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 RNU6-510P-201ENST00000391239 108 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 PGBD4P6-201ENST00000421501 610 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 AL714022.1-201ENST00000439897 151 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 RPS26P21-201ENST00000475397 348 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 RPS27AP10-201ENST00000496103 208 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 HMGN1P12-201ENST00000499125 195 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 AC108729.3-201ENST00000513484 108 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 SNORA25.17-201ENST00000517184 124 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 CYCSP27-201ENST00000527643 293 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 AC243972.3-201ENST00000539655 198 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 CYCSP39-201ENST00000565821 309 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX27Q96L92 HMGN2P15-201ENST00000585707 270 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 AL357078.3-201ENST00000607528 618 ntBASIC3.38□□□□□ -1.87
SNX27Q96L92 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
SNX27Q96L92 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNX27Q96L92 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNX27Q96L92 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SNX27Q96L92 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNX27Q96L92 RNU6-1252P-201ENST00000363054 104 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 SNORD113-7-201ENST00000363762 77 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 Y_RNA.178-201ENST00000363832 102 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 MIR34A-201ENST00000385130 110 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX27Q96L92 RPL7P10-201ENST00000417407 739 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 IFNA20P-201ENST00000436840 528 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 HIGD1AP11-201ENST00000438361 280 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 AL109933.2-201ENST00000452651 260 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 AC117503.1-201ENST00000472241 394 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 RNU4-49P-201ENST00000516080 140 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 Y_RNA.702-201ENST00000516843 96 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 RN7SKP256-201ENST00000517201 314 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.37□□□□□ -1.87
SNX27Q96L92 NDUFA5P6-201ENST00000542110 379 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 NACAP3-201ENST00000552100 481 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 LINC00933-203ENST00000559812 219 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX27Q96L92 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 AL161629.2-201ENST00000615347 275 ntBASIC3.37□□□□□ -1.87
SNX27Q96L92 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX27Q96L92 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SNX27Q96L92 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SNX27Q96L92 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNX27Q96L92 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX27Q96L92 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SNX27Q96L92 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX27Q96L92 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SNX27Q96L92 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX27Q96L92 RNU6-845P-201ENST00000362578 103 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 Z98749.2-208ENST00000381646 500 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 Y_RNA.414-201ENST00000384011 101 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 RNU6-831P-201ENST00000384548 107 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 Y_RNA.540-201ENST00000384638 111 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 SNORD15B-201ENST00000384714 146 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 AC022028.1-201ENST00000412054 408 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX27Q96L92 HMGB1P9-201ENST00000429856 646 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 AC108938.1-201ENST00000451204 136 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX27Q96L92 RNU1-143P-201ENST00000516296 146 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 RNU6-1069P-201ENST00000516612 133 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms