Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC138627.2-201ENST00000624202 601 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 AP000648.3-201ENST00000623539 4507 ntBASIC1.95□□□□□ -2.1
USP47Q96K76 CENPCP1-201ENST00000533085 2578 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 AC092104.1-201ENST00000497346 1441 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 Y_RNA.18-201ENST00000362461 102 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 RNY4P16-201ENST00000364768 94 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 U8.14-201ENST00000390843 143 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 MIR1302-8-201ENST00000408342 128 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.94□□□□□ -2.1
USP47Q96K76 AL008987.1-201ENST00000415528 237 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.94□□□□□ -2.1
USP47Q96K76 AL353706.1-201ENST00000436728 494 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 IFNA20P-201ENST00000436840 528 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.94□□□□□ -2.1
USP47Q96K76 FO393415.2-201ENST00000480085 343 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 ATP5EP1-201ENST00000510257 156 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 RNU6-914P-201ENST00000516749 109 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 AC107934.1-201ENST00000522215 217 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.94□□□□□ -2.1
USP47Q96K76 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.94□□□□□ -2.1
USP47Q96K76 AC090897.2-201ENST00000581715 130 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 uc_338.12-201ENST00000616344 181 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 U4atac.1-201ENST00000618345 95 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 AL031667.3-201ENST00000620124 655 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 AL078595.3-201ENST00000623815 1166 ntBASIC1.94□□□□□ -2.1
USP47Q96K76 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.94□□□□□ -2.1
USP47Q96K76 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.94□□□□□ -2.1
USP47Q96K76 RNU6-511P-201ENST00000363496 107 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 Y_RNA.534-201ENST00000384599 112 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 MIR518D-201ENST00000385014 87 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 MIR513B-201ENST00000385136 84 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 RNU6-1025P-201ENST00000410629 104 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.93□□□□□ -2.1
USP47Q96K76 AL160275.3-201ENST00000423876 471 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AIMP1P2-201ENST00000425294 312 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AL591704.1-201ENST00000432574 275 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 HSFY7P-201ENST00000432672 318 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 HSFY8P-201ENST00000437934 318 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 RPL22P17-201ENST00000438729 315 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.93□□□□□ -2.1
USP47Q96K76 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.93□□□□□ -2.1
USP47Q96K76 HSFY5P-201ENST00000453726 309 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.93□□□□□ -2.1
USP47Q96K76 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.93□□□□□ -2.1
USP47Q96K76 AC023790.1-201ENST00000482174 347 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 RPS3AP22-201ENST00000488297 769 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.93□□□□□ -2.1
USP47Q96K76 RNU5B-3P-201ENST00000516601 115 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 RNU6-677P-201ENST00000516914 101 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 RNU6-201P-201ENST00000517100 61 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.93□□□□□ -2.1
USP47Q96K76 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.93□□□□□ -2.1
USP47Q96K76 AC079598.5-201ENST00000547460 117 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AC090888.2-201ENST00000559765 1144 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.93□□□□□ -2.1
USP47Q96K76 AC121334.2-201ENST00000605387 271 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AL355816.2-201ENST00000610049 647 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.93□□□□□ -2.1
USP47Q96K76 RMST_2.1-201ENST00000617263 136 ntBASIC1.93□□□□□ -2.1
USP47Q96K76 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.93□□□□□ -2.1
USP47Q96K76 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.93□□□□□ -2.1
USP47Q96K76 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
USP47Q96K76 RNU1-72P-201ENST00000362976 153 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 SNORA40C-201ENST00000391285 128 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 AL353621.1-201ENST00000418219 243 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.92□□□□□ -2.1
USP47Q96K76 AC006366.1-201ENST00000422002 759 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.92□□□□□ -2.1
USP47Q96K76 AL353777.1-201ENST00000425552 326 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.92□□□□□ -2.1
USP47Q96K76 RPL37P21-201ENST00000435890 276 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 AL078601.1-201ENST00000444542 271 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 GDI2P2-201ENST00000445131 608 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.92□□□□□ -2.1
USP47Q96K76 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.92□□□□□ -2.1
USP47Q96K76 AC018437.1-201ENST00000492214 406 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.92□□□□□ -2.1
USP47Q96K76 AC109927.2-201ENST00000506416 303 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 RNU2-10P-201ENST00000516375 211 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 RNU6-1092P-201ENST00000516955 87 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.92□□□□□ -2.1
USP47Q96K76 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.92□□□□□ -2.1
USP47Q96K76 MIR3126-201ENST00000577443 74 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 MIR1273C-201ENST00000578669 77 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 AC025165.5-201ENST00000602802 578 ntBASIC1.92□□□□□ -2.1
USP47Q96K76 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.92□□□□□ -2.1
USP47Q96K76 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
USP47Q96K76 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.91□□□□□ -2.1
USP47Q96K76 AC138393.1-203ENST00000327086 343 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 RNU6-660P-201ENST00000364566 109 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 RNA5SP240-201ENST00000365355 128 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 RNU6-946P-201ENST00000383878 107 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 CIR1P3-201ENST00000405137 479 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 AC092809.3-201ENST00000415453 231 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.91□□□□□ -2.1
USP47Q96K76 RPL7P34-201ENST00000433316 712 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 AL161788.1-201ENST00000441805 169 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 AC009238.1-201ENST00000442165 424 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 AC009237.6-201ENST00000446969 424 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms