Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC135507.2-201ENST00000612443 309 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 AC025034.2-201ENST00000623264 286 ntBASIC2.56□□□□□ -2
PDLIM5Q96HC4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PDLIM5Q96HC4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.56□□□□□ -2
PDLIM5Q96HC4 RNU6-179P-201ENST00000363350 107 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 RNA5SP387-201ENST00000364226 106 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 Y_RNA.255-201ENST00000364581 97 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 RNU6-996P-201ENST00000365438 107 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 RNU6-898P-201ENST00000365627 104 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 Y_RNA.576-201ENST00000384781 102 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC007064.1-201ENST00000412238 351 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 MTCYBP8-201ENST00000422855 651 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 RPL30P4-201ENST00000429309 333 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC073415.1-201ENST00000449240 153 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AL163973.1-201ENST00000484753 577 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 RBBP4P6-201ENST00000508098 202 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC108078.2-201ENST00000510750 236 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC096725.1-201ENST00000514266 313 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 OR5AL2P-201ENST00000532185 920 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC093536.2-201ENST00000565257 1406 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC106782.4-201ENST00000568264 210 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AL158032.1-201ENST00000605401 106 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 FER-210ENST00000628534 558 ntTSL 5 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 AL137790.1-201ENST00000634283 177 ntBASIC2.55□□□□□ -2
PDLIM5Q96HC4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.55□□□□□ -2
PDLIM5Q96HC4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
PDLIM5Q96HC4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDLIM5Q96HC4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 RNY3P3-201ENST00000363816 102 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 RNU6-1029P-201ENST00000384109 107 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 RNU6-903P-201ENST00000391270 109 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 UBE2V1P2-201ENST00000397758 440 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AL139095.1-201ENST00000404326 391 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC097463.2-201ENST00000421074 142 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 NFU1P2-201ENST00000448700 469 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 AL139109.1-201ENST00000455491 297 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AL162395.1-201ENST00000457882 422 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 RPS29P15-201ENST00000458329 171 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 RNU7-63P-201ENST00000459054 62 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 RNA5SP401-201ENST00000515920 127 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC243972.3-201ENST00000539655 198 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 AL133241.1-201ENST00000556832 487 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AL138976.2-201ENST00000563989 694 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC234778.2-201ENST00000566241 354 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM5Q96HC4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDLIM5Q96HC4 U6.42-201ENST00000618440 107 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 YWHAEP7-203ENST00000622054 312 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC024940.5-201ENST00000622889 474 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC244517.12-201ENST00000623581 663 ntBASIC2.54□□□□□ -2
PDLIM5Q96HC4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PDLIM5Q96HC4 AC103710.2-202ENST00000641454 2853 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 Z75746.1-201ENST00000440243 2080 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.53□□□□□ -2
PDLIM5Q96HC4 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 Y_RNA.295-201ENST00000364918 102 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 Z98749.2-208ENST00000381646 500 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 Y_RNA.390-201ENST00000383932 102 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 RNU2-63P-201ENST00000410792 194 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 RNU6-1068P-201ENST00000410958 103 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM5Q96HC4 AC092809.3-201ENST00000415453 231 ntBASIC2.53□□□□□ -2
PDLIM5Q96HC4 CYCSP48-201ENST00000417124 323 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms