| PGAP3 | Q96FM1 | TPT1P7-201 | ENST00000458300 | 517 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC117503.1-201 | ENST00000472241 | 394 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | SRI-210 | ENST00000490437 | 570 nt | TSL 2 BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC092666.1-201 | ENST00000492054 | 573 nt | TSL 4 BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC091133.4-201 | ENST00000511142 | 308 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC022360.2-201 | ENST00000522390 | 456 nt | TSL 3 BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AP003392.2-201 | ENST00000527269 | 208 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC138625.1-201 | ENST00000567556 | 483 nt | TSL 3 BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC105137.2-201 | ENST00000569073 | 466 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | LINC01195-201 | ENST00000570118 | 451 nt | TSL 3 BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC087683.1-201 | ENST00000591187 | 441 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC091805.2-201 | ENST00000603848 | 235 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC093788.1-201 | ENST00000609356 | 927 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL031601.2-202 | ENST00000622650 | 282 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | OR5K1-202 | ENST00000642057 | 3466 nt | APPRIS P1 BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL139276.1-201 | ENST00000311910 | 1001 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | Y_RNA.1-201 | ENST00000352915 | 104 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | Y_RNA.480-201 | ENST00000384364 | 102 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU2-3P-201 | ENST00000410144 | 191 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU4-55P-201 | ENST00000410731 | 137 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL513008.1-201 | ENST00000412701 | 161 nt | TSL 5 BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC003685.2-201 | ENST00000422795 | 395 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | MTCO2P19-201 | ENST00000427513 | 598 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | TH2LCRR-203 | ENST00000457489 | 439 nt | TSL 3 BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | CKS1BP2-201 | ENST00000497342 | 240 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC109329.1-201 | ENST00000518744 | 317 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | NTS-203 | ENST00000551529 | 801 nt | TSL 3 BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | PSMA3P-201 | ENST00000555485 | 635 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC136619.2-201 | ENST00000563361 | 631 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AGGF1P4-201 | ENST00000568249 | 801 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | MTCYBP33-201 | ENST00000575007 | 1130 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | MIR3941-201 | ENST00000582572 | 103 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | MIR4658-201 | ENST00000584344 | 65 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL391646.1-201 | ENST00000603860 | 190 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | NDUFA8P1-201 | ENST00000605525 | 367 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | MIR5739-201 | ENST00000619803 | 80 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC022418.1-201 | ENST00000624118 | 445 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC016717.2-201 | ENST00000609089 | 5141 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | LINC00836-202 | ENST00000626230 | 1640 nt | TSL 2 BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | EYS-202 | ENST00000342421 | 2168 nt | TSL 1 (best) BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | OFD1P6Y-202 | ENST00000451061 | 2724 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | TXLNGY-201 | ENST00000253320 | 7299 nt | TSL 2 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | ESF1-202 | ENST00000617257 | 1470 nt | TSL 5 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | TSGA10-205 | ENST00000410001 | 3036 nt | APPRIS P2 TSL 1 (best) BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | CCPG1-203 | ENST00000442196 | 3453 nt | APPRIS P1 TSL 2 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU6-1010P-201 | ENST00000362757 | 107 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU5E-7P-201 | ENST00000365290 | 117 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | SNORD70.1-201 | ENST00000391007 | 85 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU2-63P-201 | ENST00000410792 | 194 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC064871.1-202 | ENST00000413954 | 382 nt | TSL 5 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | CYCSP33-201 | ENST00000414485 | 327 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC010731.2-201 | ENST00000415275 | 440 nt | TSL 3 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | CYCSP48-201 | ENST00000417124 | 323 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | TTTY8-202 | ENST00000426035 | 518 nt | TSL 1 (best) BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL451074.3-201 | ENST00000437709 | 472 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RPS12P2-201 | ENST00000439728 | 269 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC104688.1-201 | ENST00000447158 | 419 nt | TSL 3 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | TTTY8B-202 | ENST00000455570 | 518 nt | TSL 1 (best) BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL353780.1-201 | ENST00000455583 | 458 nt | TSL 2 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | CYP2C59P-201 | ENST00000457790 | 269 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | LINC02174-201 | ENST00000508977 | 553 nt | TSL 3 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | MTCO3P7-201 | ENST00000510008 | 774 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC010210.1-203 | ENST00000513905 | 260 nt | TSL 3 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RN7SKP219-201 | ENST00000516825 | 296 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | CKS1BP7-201 | ENST00000522230 | 235 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC091047.1-201 | ENST00000533344 | 552 nt | TSL 4 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | BNIP3P6-201 | ENST00000549284 | 499 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC024909.2-201 | ENST00000553035 | 286 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL133241.1-201 | ENST00000556832 | 487 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC008752.3-201 | ENST00000588113 | 712 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC004223.2-201 | ENST00000590309 | 544 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC073410.2-201 | ENST00000603240 | 332 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC012507.3-201 | ENST00000603556 | 477 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL121917.1-203 | ENST00000605534 | 577 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AP001596.2-201 | ENST00000608410 | 312 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC073534.2-201 | ENST00000620377 | 381 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RMST_7.1-201 | ENST00000621935 | 268 nt | BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC007405.1-203 | ENST00000623667 | 932 nt | TSL 5 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC006355.2-201 | ENST00000629240 | 317 nt | TSL 3 BASIC | 2.59 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | TAB3-205 | ENST00000378933 | 6671 nt | APPRIS P1 TSL 1 (best) BASIC | 2.59 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | CEP44-203 | ENST00000426172 | 3037 nt | TSL 5 BASIC | 2.59 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | C1orf141-203 | ENST00000371007 | 2153 nt | APPRIS P3 TSL 5 BASIC | 2.59 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | NETO1-202 | ENST00000397929 | 1849 nt | TSL 1 (best) BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | SNX10-209 | ENST00000619420 | 2361 nt | APPRIS ALT1 TSL 5 BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | MYSM1-208 | ENST00000622766 | 6020 nt | TSL 1 (best) BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | U3.12-201 | ENST00000364498 | 214 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | RNA5SP125-201 | ENST00000364843 | 120 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | Y_RNA.324-201 | ENST00000365165 | 102 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | RNA5SP240-201 | ENST00000365355 | 128 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | RNU6-996P-201 | ENST00000365438 | 107 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | RNU6-1127P-201 | ENST00000384580 | 107 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | AL359511.1-201 | ENST00000402970 | 211 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | RNA5SP390-201 | ENST00000410191 | 113 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | BTF3L4P1-201 | ENST00000413813 | 468 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | LINC02559-201 | ENST00000420391 | 188 nt | TSL 2 BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | EIF4EP4-201 | ENST00000424916 | 578 nt | BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | AC092839.1-201 | ENST00000433475 | 536 nt | TSL 4 BASIC | 2.58 | □□□□□ -2 | | |
| PGAP3 | Q96FM1 | KRTAP19-11P-201 | ENST00000439851 | 104 nt | BASIC | 2.58 | □□□□□ -2 | | |