Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SNORD46.1-201ENST00000364139 104 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 RNU6-596P-201ENST00000365395 98 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 RNU6-898P-201ENST00000365627 104 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 RNU6-890P-201ENST00000384121 107 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 RNU6-692P-201ENST00000384496 107 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 RNU6-55P-201ENST00000411092 107 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AL163540.1-201ENST00000485382 386 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 SMURF2P1-201ENST00000514992 481 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AC107934.2-201ENST00000518653 310 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 RNU6-988P-201ENST00000519081 107 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AC103996.1-201ENST00000555468 102 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 CPDP1-201ENST00000579660 283 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AC022432.1-201ENST00000595739 310 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AC009314.1-201ENST00000603871 304 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 HSPE1P7-201ENST00000604681 321 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AL138880.2-201ENST00000616214 239 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 AL136164.4-201ENST00000625013 2135 ntBASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CTHRC1Q96CG8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CTHRC1Q96CG8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CTHRC1Q96CG8 RNU6-270P-201ENST00000364131 105 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 RNU6-1317P-201ENST00000364582 104 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 Z98749.2-208ENST00000381646 500 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 RNU6-331P-201ENST00000384724 107 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AL117339.3-201ENST00000418733 162 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AL133396.1-201ENST00000432048 687 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 MTND4P19-201ENST00000446659 478 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 SSXP4-201ENST00000451349 245 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 MIR2053-201ENST00000459295 91 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 RNU6-470P-201ENST00000515954 104 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 ELOCP31-201ENST00000540463 467 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AC005476.1-201ENST00000554427 397 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AC109446.1-201ENST00000566172 220 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AC006504.6-201ENST00000590142 199 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 MTND4LP5-201ENST00000605152 292 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 RMST_8.1-201ENST00000610287 165 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 AC068831.7-201ENST00000616954 363 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 PLCE1P1-201ENST00000622094 305 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 uc_338.22-201ENST00000622722 187 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 SNORA50A-202ENST00000629536 136 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 U4.7-201ENST00000638126 106 ntBASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.15□□□□□ -1.91
CTHRC1Q96CG8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 RNU6-490P-201ENST00000362985 107 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 RNA5SP197-201ENST00000363357 119 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 RNU6-527P-201ENST00000363425 104 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 RNU6-1059P-201ENST00000363752 98 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 RNU1-33P-201ENST00000364249 162 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 RNA5SP72-201ENST00000364442 117 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 MIR34B-201ENST00000385076 84 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC126124.2-201ENST00000413542 321 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 SETP5-201ENST00000437270 562 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC098831.1-201ENST00000440661 216 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC125238.1-201ENST00000448842 249 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 CYCSP35-201ENST00000451978 304 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC013470.1-201ENST00000453438 462 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 snoU13.28-201ENST00000459235 104 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC008155.2-201ENST00000464337 397 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 RPL7P49-201ENST00000471402 708 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.711-201ENST00000516993 102 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC023442.1-201ENST00000531247 422 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms