Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL132765.2-201ENST00000610812 351 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.54□□□□□ -1.84
HPS3Q969F9 uc_338.25-201ENST00000613756 156 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.54□□□□□ -1.84
HPS3Q969F9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.54□□□□□ -1.84
HPS3Q969F9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HPS3Q969F9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HPS3Q969F9 CDC27P3-201ENST00000635418 1910 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 AC092435.3-201ENST00000565538 3654 ntBASIC3.54□□□□□ -1.84
HPS3Q969F9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HPS3Q969F9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.53□□□□□ -1.84
HPS3Q969F9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HPS3Q969F9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HPS3Q969F9 RNU1-105P-201ENST00000363470 161 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 SNORD73A-201ENST00000386062 65 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 MIR548K-201ENST00000408406 116 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 MIR548F5-201ENST00000408421 86 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 RNU6-293P-201ENST00000411259 106 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 AC096664.2-201ENST00000411843 406 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.53□□□□□ -1.84
HPS3Q969F9 AL353705.1-201ENST00000433468 480 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 AL645568.3-201ENST00000433683 316 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.53□□□□□ -1.84
HPS3Q969F9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HPS3Q969F9 AC130509.1-201ENST00000464158 433 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 AC092436.3-201ENST00000511788 257 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.53□□□□□ -1.84
HPS3Q969F9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.53□□□□□ -1.84
HPS3Q969F9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.53□□□□□ -1.84
HPS3Q969F9 AL121821.2-201ENST00000556081 394 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 AL157817.1-201ENST00000614264 790 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 MIR7112-201ENST00000616126 65 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.53□□□□□ -1.84
HPS3Q969F9 MIR3651-201ENST00000630427 90 ntBASIC3.53□□□□□ -1.84
HPS3Q969F9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HPS3Q969F9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HPS3Q969F9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
HPS3Q969F9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HPS3Q969F9 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 SNORA38.1-201ENST00000364172 131 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPS3Q969F9 SAR1AP2-201ENST00000392696 594 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.52□□□□□ -1.85
HPS3Q969F9 RPS15AP10-201ENST00000432472 382 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 MTND1P17-201ENST00000448961 204 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.52□□□□□ -1.85
HPS3Q969F9 RPS29P2-201ENST00000479278 136 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 RPS27P27-201ENST00000498779 255 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 AC116655.1-201ENST00000508324 901 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.52□□□□□ -1.85
HPS3Q969F9 AC104576.1-201ENST00000524225 88 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 AP005639.2-201ENST00000527592 928 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HPS3Q969F9 AC010186.2-204ENST00000537668 439 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 AC006199.1-201ENST00000548728 219 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 ELOCP5-201ENST00000604924 333 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 AC073657.2-201ENST00000605661 303 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 AC112487.2-201ENST00000637950 304 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 AC004944.1-201ENST00000517807 3059 ntBASIC3.52□□□□□ -1.85
HPS3Q969F9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPS3Q969F9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPS3Q969F9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.51□□□□□ -1.85
HPS3Q969F9 MAPK10-322ENST00000641485 4530 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 RNU4-73P-201ENST00000363164 141 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 RNU1-100P-201ENST00000365255 165 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 Y_RNA.384-201ENST00000383909 102 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 RPL37P10-201ENST00000412884 288 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 RPL7P37-201ENST00000425095 738 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC124916.1-201ENST00000444020 547 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC012308.1-201ENST00000451232 178 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC092001.1-201ENST00000453012 261 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 BX510359.1-201ENST00000456973 237 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 Y_RNA.635-201ENST00000459041 101 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 RNU6-1037P-201ENST00000459571 107 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 MTND5P5-201ENST00000503764 376 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.51□□□□□ -1.85
HPS3Q969F9 MTND4LP22-201ENST00000508209 276 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.51□□□□□ -1.85
HPS3Q969F9 RN7SKP24-201ENST00000515888 284 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 RNU6-581P-201ENST00000516214 105 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 Y_RNA.675-201ENST00000516389 149 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.51□□□□□ -1.85
HPS3Q969F9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.51□□□□□ -1.85
HPS3Q969F9 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC025281.1-201ENST00000567026 265 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC011471.1-201ENST00000585766 187 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC020895.1-201ENST00000595362 272 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC024153.1-201ENST00000603103 365 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 C8orf59P2-201ENST00000603441 271 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AC113139.1-201ENST00000605049 239 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 AL359697.1-201ENST00000624879 587 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 MIR1302-1-201ENST00000637932 143 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HPS3Q969F9 MTND4P29-201ENST00000503122 1372 ntBASIC3.51□□□□□ -1.85
HPS3Q969F9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.5□□□□□ -1.85
HPS3Q969F9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HPS3Q969F9 RNU6-858P-201ENST00000362436 107 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 RNU6-78P-201ENST00000362897 107 ntBASIC3.5□□□□□ -1.85
HPS3Q969F9 RNA5SP354-201ENST00000391247 136 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms