Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 RNU6-1197P-201ENST00000391183 107 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 MTCYBP2-201ENST00000407745 171 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 RNA5SP239-201ENST00000410218 129 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 SNORA57.3-201ENST00000411095 141 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 RPS6P12-201ENST00000432491 726 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 snoU13.22-201ENST00000459428 104 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AC006517.1-201ENST00000480485 328 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AC074133.1-201ENST00000515696 183 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 RNU6-377P-201ENST00000515965 102 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 RNU6-612P-201ENST00000516909 102 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AL139395.1-201ENST00000603662 160 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AC024220.1-201ENST00000603675 484 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AC008962.1-201ENST00000605729 304 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AC027309.3-201ENST00000623419 351 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AC027290.2-201ENST00000623210 18662 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 RNU6-50P-201ENST00000362356 103 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 Y_RNA.233-201ENST00000364407 101 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 Y_RNA.240-201ENST00000364469 95 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 RNU6-937P-201ENST00000384325 106 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 RNU6-140P-201ENST00000384566 108 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 MIR200C-201ENST00000384980 68 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 SNORA53-201ENST00000391141 249 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 RNA5SP44-201ENST00000410446 133 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 TMEM167AP1-201ENST00000423409 219 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 AC083863.1-201ENST00000438811 231 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 AC010186.2-204ENST00000537668 439 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 SRGNP1-201ENST00000603392 451 ntBASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TMEM40Q8WWA1 USP8P1-201ENST00000494673 3183 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 MIR208A-201ENST00000362287 71 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 Y_RNA.44-201ENST00000362676 108 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 RNU6-428P-201ENST00000362942 107 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 Y_RNA.358-201ENST00000365491 99 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 RNU6-918P-201ENST00000391219 106 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 AL079342.1-201ENST00000401460 267 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 BMS1P22-201ENST00000414726 313 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 AC093578.1-201ENST00000415219 368 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 AL512844.2-201ENST00000433990 593 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 RPL30P5-201ENST00000494923 336 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 RNU6-496P-201ENST00000516145 99 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 AC023824.2-201ENST00000566185 400 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 MIR4782-201ENST00000577987 79 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 SNORA51-201ENST00000606420 132 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 SCARNA4-202ENST00000625402 129 ntBASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.28□□□□□ -1.72
TMEM40Q8WWA1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 SNORA70.4-201ENST00000365509 134 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 Y_RNA.497-201ENST00000384447 98 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 MIR449B-201ENST00000384995 97 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 SNORA3.3-201ENST00000408712 125 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 Y_RNA.629-201ENST00000411368 105 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 AL139247.1-201ENST00000422768 325 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 NDUFB4P6-201ENST00000436819 366 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 snoU109.2-201ENST00000459316 135 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 COX6CP14-201ENST00000469580 174 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 RN7SL585P-201ENST00000470538 280 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 RNU1-95P-201ENST00000516357 160 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 RNU1-128P-201ENST00000516704 160 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 AL442163.3-201ENST00000554110 156 ntBASIC4.27□□□□□ -1.73
TMEM40Q8WWA1 AC005476.1-201ENST00000554427 397 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms