Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC093899.1-201ENST00000457984 376 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC114786.4-201ENST00000508771 728 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.675-201ENST00000516389 149 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC090572.1-201ENST00000519251 160 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AP002453.2-201ENST00000533503 320 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AP000403.1-201ENST00000603349 851 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC104073.3-201ENST00000610942 955 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AC008250.2-201ENST00000615261 205 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AL161629.2-201ENST00000615347 275 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 AP001506.1-201ENST00000615444 211 ntBASIC1.61□□□□□ -2.15
SHROOM3Q8TF72 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.201-201ENST00000364052 96 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 MIR627-201ENST00000384979 97 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 RPS3AP36-201ENST00000398190 775 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 RNU2-8P-201ENST00000410727 190 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 UBE2D3P2-201ENST00000424409 445 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 GPM6BP2-201ENST00000432046 144 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC119618.1-201ENST00000434191 222 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 GPM6BP1-201ENST00000446387 144 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.688-201ENST00000516565 95 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 RPPH1-2P-201ENST00000516688 293 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 SNORD19.2-201ENST00000516978 73 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC060788.1-201ENST00000521318 469 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AL138976.2-201ENST00000563989 694 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 MIR4421-201ENST00000578133 69 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 MIR3682-201ENST00000581338 84 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC103987.3-201ENST00000582071 292 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC010620.1-201ENST00000601088 1102 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC245008.1-201ENST00000608123 476 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 FTX_3.1-201ENST00000610451 147 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AC073114.1-201ENST00000612027 490 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 MIR6863-201ENST00000636112 90 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 MTND1P37-201ENST00000636562 264 ntBASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SHROOM3Q8TF72 RNU6-181P-201ENST00000363225 107 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 RNU6-108P-201ENST00000365558 107 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 RNU6-641P-201ENST00000384006 107 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 RNU6-533P-201ENST00000384144 107 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 RNU2-33P-201ENST00000410344 192 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 ZNF90P2-204ENST00000419323 1075 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 SEPT2P1-201ENST00000419651 180 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 RPL23AP30-201ENST00000432419 501 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AL591704.1-201ENST00000432574 275 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 UBBP3-201ENST00000445497 241 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AL139109.1-201ENST00000455491 297 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 COX6CP14-201ENST00000469580 174 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 RAP1BP2-201ENST00000478270 544 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 EIF4EP3-201ENST00000498782 656 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 MRPS36P2-201ENST00000512569 299 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.672-201ENST00000516289 104 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 RNU6-445P-201ENST00000516949 107 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 RNU6-410P-201ENST00000517006 107 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AC011979.2-201ENST00000527568 352 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AL161670.1-201ENST00000554348 137 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 TRAV28-201ENST00000557548 323 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 HSPE1P7-201ENST00000604681 321 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AC004805.2-201ENST00000605382 482 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AL161734.1-201ENST00000609720 557 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AC012409.4-201ENST00000612923 249 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AC130324.3-201ENST00000614165 542 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 AL353770.2-201ENST00000620024 78 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms