Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 Y_RNA.5-201ENST00000362334 102 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 Y_RNA.31-201ENST00000362574 102 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 SNORD56.3-201ENST00000363507 71 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 RNU6-1059P-201ENST00000363752 98 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 RNU1-73P-201ENST00000383971 164 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 MIR218-2-201ENST00000385006 110 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 RN7SKP27-201ENST00000410684 333 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 RNU6-325P-201ENST00000411132 105 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 RPL26P27-201ENST00000414397 437 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 AC093151.1-201ENST00000427711 313 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 DAP3P1-201ENST00000441522 278 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 RPL21P23-201ENST00000446654 460 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 MTND4P19-201ENST00000446659 478 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 AC018437.1-201ENST00000492214 406 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 SNORA67.7-201ENST00000516664 135 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 RNU6-1183P-201ENST00000517054 60 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 AC109479.2-201ENST00000517842 174 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 MIR4782-201ENST00000577987 79 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 AL161629.2-201ENST00000615347 275 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 FAM35BP-202ENST00000497389 3337 ntBASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.56□□□□□ -1.84
CCHCR1Q8TD31 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 RNU6-270P-201ENST00000364131 105 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 SNORA33.2-201ENST00000365413 134 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 DYNLT3P1-201ENST00000378574 347 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 Y_RNA.422-201ENST00000384054 114 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 RNU6-72P-201ENST00000384285 79 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 RPS29P4-201ENST00000414733 161 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AL356968.1-201ENST00000416622 474 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AC018865.2-201ENST00000423631 129 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 CYCSP4-201ENST00000429682 331 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 RNA5SP310-201ENST00000459084 116 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AC006483.1-201ENST00000487308 313 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 Y_RNA.687-201ENST00000516558 91 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 RNA5SP384-201ENST00000516615 116 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 HIGD1AP1-201ENST00000550979 275 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 MIR1254-2-201ENST00000579553 63 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AL360085.1-201ENST00000604713 532 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 AC092608.2-201ENST00000624427 218 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 MTND5P30-201ENST00000452896 1731 ntBASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCHCR1Q8TD31 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 Y_RNA.28-201ENST00000362554 111 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 RNU6-827P-201ENST00000365553 106 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 Y_RNA.463-201ENST00000384271 102 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 RNU6-738P-201ENST00000384531 106 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 SNORA1.3-201ENST00000384676 136 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 MIR518D-201ENST00000385014 87 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 RNU6-1106P-201ENST00000390845 107 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 RN7SKP111-201ENST00000410349 271 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 RNU6-174P-201ENST00000410406 106 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 HMGN2P30-201ENST00000423237 256 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 RPS15AP10-201ENST00000432472 382 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AC098831.1-201ENST00000440661 216 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 MIR2053-201ENST00000459295 91 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 RPL21P129-201ENST00000491732 478 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AC006445.2-201ENST00000510061 472 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 LINC00933-203ENST00000559812 219 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 MTCO3P13-201ENST00000577757 781 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AC005899.2-201ENST00000584353 90 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 MIR4506-201ENST00000584693 77 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AL133393.1-201ENST00000603277 287 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 U3.45-201ENST00000607547 219 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 SCARNA4-202ENST00000625402 129 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 AC008264.2-201ENST00000610193 3731 ntBASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCHCR1Q8TD31 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms