Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR506-201ENST00000384998 124 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC078974.1-201ENST00000411597 223 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 SNORD116-28-201ENST00000516123 91 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 RNU6-1004P-201ENST00000516584 111 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 RNU6-730P-201ENST00000383954 104 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 RNU6-217P-201ENST00000384164 104 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 RNU6-110P-201ENST00000384508 104 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 FO393419.3-201ENST00000428741 282 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 RSU1P2-202ENST00000437884 485 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC013470.4-201ENST00000619978 986 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 RNU6-611P-201ENST00000384276 104 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 RNA5SP56-201ENST00000410277 118 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 Y_RNA.700-201ENST00000516806 100 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 NACAP3-201ENST00000552100 481 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC124947.2-202ENST00000552735 133 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 uc_338.17-201ENST00000619633 179 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC123767.1-202ENST00000620407 817 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 MIR19B1-201ENST00000384829 87 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 RN7SKP142-201ENST00000411236 328 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 HMGN3P1-201ENST00000453847 193 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 CYP2C59P-201ENST00000457790 269 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 RAP1BP2-201ENST00000478270 544 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC022616.2-201ENST00000523185 300 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC141557.1-201ENST00000540982 400 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 MIR548AX-201ENST00000580117 73 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AC092953.2-201ENST00000608000 699 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 AL391597.1-201ENST00000618707 694 ntBASIC0.13□□□□□ -2.39
ALMS1Q8TCU4 Y_RNA.25-201ENST00000362528 102 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 RNU6-112P-201ENST00000363599 104 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 SNORA14.1-201ENST00000516113 141 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 NRON-201ENST00000517270 370 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 MIR4768-201ENST00000585270 74 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC018618.2-201ENST00000604770 446 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC104465.1-201ENST00000611365 139 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC090772.4-201ENST00000623599 362 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 MTND4P8-201ENST00000514997 1362 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 MIR1468-201ENST00000410600 86 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 RPL26P27-201ENST00000414397 437 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 NANOGP2-201ENST00000435391 727 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 FABP5P14-201ENST00000437273 393 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 RPL30P7-201ENST00000479312 323 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 RNA5SP503-201ENST00000517047 117 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC025588.3-201ENST00000604182 274 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC009233.1-201ENST00000616477 371 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 MIR888-201ENST00000401186 77 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC069282.1-201ENST00000411911 526 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 USP9YP19-201ENST00000412165 485 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 USP9YP13-201ENST00000417797 480 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 NDUFB4P10-201ENST00000452541 359 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC092757.1-201ENST00000467293 467 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AC090578.1-201ENST00000604955 591 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 AL022345.2-201ENST00000606307 135 ntBASIC0.12□□□□□ -2.39
ALMS1Q8TCU4 MT-TC-201ENST00000387405 66 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 C1DP1-201ENST00000426049 402 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 RPL36P19-201ENST00000430744 301 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 MTCO3P2-201ENST00000457365 171 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 AC025465.3-201ENST00000510570 311 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 CYB5AP5-201ENST00000549779 389 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 MIR4645-201ENST00000583158 77 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 RNU6-140P-201ENST00000384566 108 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 MIR1207-201ENST00000408249 87 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 MRPS17P3-201ENST00000465453 385 ntBASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.11□□□□□ -2.39
ALMS1Q8TCU4 AC002400.1-201ENST00000569310 726 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms