Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU4-90P-201ENST00000362773 141 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 Y_RNA.76-201ENST00000362931 109 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RNU6-662P-201ENST00000384253 104 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 MIR325-201ENST00000385260 98 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RNA5SP306-201ENST00000411087 107 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 Y_RNA.793-201ENST00000411222 111 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RAB9AP3-201ENST00000412737 573 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AC004552.1-201ENST00000419089 348 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AL353748.1-201ENST00000440753 474 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AC016700.2-201ENST00000446011 156 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AL031659.1-201ENST00000447075 539 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RAB9AP1-201ENST00000449393 573 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RNU7-120P-201ENST00000459334 63 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RPS26P3-201ENST00000470205 348 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AC090543.2-201ENST00000483963 348 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AC004057.1-201ENST00000485827 348 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AF186996.7-201ENST00000492781 209 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RNU6-255P-201ENST00000516957 105 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RNU6-1212P-201ENST00000517023 104 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AP004607.1-201ENST00000524456 203 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RMST_6.1-201ENST00000611980 203 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AL773545.4-201ENST00000637262 310 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AL513478.4-201ENST00000641636 310 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 FTLP6-201ENST00000355274 422 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 SNORA60-201ENST00000362396 134 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 RNU6-942P-201ENST00000363002 107 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 RNU6-527P-201ENST00000363425 104 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 Y_RNA.199-201ENST00000364014 102 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 RNU6-926P-201ENST00000384075 107 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 RNU6-140P-201ENST00000384566 108 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 RNU1-139P-201ENST00000391307 165 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC011742.1-201ENST00000431448 434 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC007389.2-201ENST00000434630 306 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC005002.2-201ENST00000438228 269 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC243964.1-201ENST00000441814 261 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC124916.1-201ENST00000444020 547 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AL353705.4-201ENST00000449661 238 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 RN7SL271P-201ENST00000487601 295 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 RPL23AP49-201ENST00000492925 468 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC091874.1-201ENST00000511402 339 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 H3F3AP1-201ENST00000559984 334 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC007224.1-201ENST00000564410 144 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 ZNF192P1-203ENST00000565888 810 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 MIR3910-1-201ENST00000580936 111 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 U2.21-201ENST00000637295 81 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.8□□□□□ -1.8
NUP43Q8NFH3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP43Q8NFH3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 RNU6-187P-201ENST00000384139 106 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 MIR32-201ENST00000384965 70 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 RPL23AP48-201ENST00000406913 488 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 HSPE1P12-201ENST00000412576 301 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 RPS15AP7-201ENST00000439294 405 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 AC098831.1-201ENST00000440661 216 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 NUTF2P3-201ENST00000448540 384 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 AP000870.1-201ENST00000472927 406 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 RPL31P13-201ENST00000484151 370 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 MIR2116-201ENST00000517221 80 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 AP003730.1-201ENST00000524605 285 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 MIR92B-201ENST00000607575 96 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 AC023043.4-201ENST00000612081 449 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 MIR7151-201ENST00000617477 60 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 AL445567.2-201ENST00000618935 498 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
NUP43Q8NFH3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUP43Q8NFH3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms