Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AL451074.5-201ENST00000415894 435 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AC009414.1-201ENST00000427200 443 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AL627311.1-201ENST00000431514 115 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AL139415.2-201ENST00000431968 163 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.17□□□□□ -1.9
USP38Q8NB14 Z96811.1-201ENST00000445880 108 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.17□□□□□ -1.9
USP38Q8NB14 AC092001.1-201ENST00000453012 261 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.17□□□□□ -1.9
USP38Q8NB14 MTCO3P38-201ENST00000468910 766 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
USP38Q8NB14 RNU2-69P-201ENST00000516061 100 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 RNU1-86P-201ENST00000516108 154 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 MIR892C-201ENST00000516410 77 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 RNU1-107P-201ENST00000516617 154 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 SNORD60.2-201ENST00000516883 86 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
USP38Q8NB14 AC021739.1-201ENST00000559631 174 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AC092325.1-201ENST00000566449 554 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AC010525.2-201ENST00000590920 195 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AC005498.1-201ENST00000592125 465 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 Z82243.1-201ENST00000609432 473 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP38Q8NB14 AC007014.2-201ENST00000615581 479 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 UCA1.1-201ENST00000620952 75 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AL031601.2-202ENST00000622650 282 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 OR4G1P-203ENST00000641984 1631 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 AC004520.1-201ENST00000608362 1413 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.17□□□□□ -1.9
USP38Q8NB14 ZNF658B-202ENST00000615961 3375 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USP38Q8NB14 Y_RNA.256-201ENST00000364594 104 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 RNU6-1280P-201ENST00000365211 107 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 Z98749.2-208ENST00000381646 500 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 RNA5SP219-201ENST00000390940 113 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 RPL21P75-201ENST00000396599 483 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AL360182.1-201ENST00000397433 468 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 RPL21P28-201ENST00000401418 483 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.16□□□□□ -1.9
USP38Q8NB14 AL592114.1-201ENST00000403842 483 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AC016831.2-201ENST00000417179 352 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AL365496.1-201ENST00000426885 215 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.16□□□□□ -1.9
USP38Q8NB14 AC098831.1-201ENST00000440661 216 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AC009296.1-201ENST00000443146 155 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 HMGN2P10-201ENST00000448085 265 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.16□□□□□ -1.9
USP38Q8NB14 RPL21P39-201ENST00000463605 483 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 RPL21P93-201ENST00000480465 489 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AC087190.1-201ENST00000484462 480 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AC093591.1-201ENST00000491435 481 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 RPL21P16-201ENST00000495531 483 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 CCDC34P1-201ENST00000507441 517 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.16□□□□□ -1.9
USP38Q8NB14 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.16□□□□□ -1.9
USP38Q8NB14 DEFB122-202ENST00000569013 197 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AC020895.1-201ENST00000595362 272 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AC069234.5-201ENST00000611056 416 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 AC002064.3-201ENST00000623448 346 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP38Q8NB14 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.16□□□□□ -1.9
USP38Q8NB14 AC099654.7-201ENST00000635788 2127 ntBASIC3.16□□□□□ -1.9
USP38Q8NB14 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.9
USP38Q8NB14 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
USP38Q8NB14 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
USP38Q8NB14 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.15□□□□□ -1.91
USP38Q8NB14 SNORD14B-201ENST00000364533 90 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 RNU4-20P-201ENST00000365601 151 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 RNU6-38P-201ENST00000384085 107 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 MIR9-1-201ENST00000385198 89 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 BX682237.1-201ENST00000415016 335 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 AL353621.1-201ENST00000418219 243 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.15□□□□□ -1.91
USP38Q8NB14 NIPA2P5-201ENST00000452282 464 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 RPS3P1-201ENST00000456781 192 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 RNU6-333P-201ENST00000459117 107 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.15□□□□□ -1.91
USP38Q8NB14 RNA5SP76-201ENST00000516277 87 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 AC006199.1-201ENST00000548728 219 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 AC005261.5-201ENST00000596280 355 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 AC011890.2-201ENST00000613393 294 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 AC022418.1-201ENST00000624118 445 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 AC241585.2-209ENST00000638217 143 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.15□□□□□ -1.91
USP38Q8NB14 GABRG2-229ENST00000641017 3628 ntBASIC3.15□□□□□ -1.91
USP38Q8NB14 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.15□□□□□ -1.91
USP38Q8NB14 AC138915.1-201ENST00000565427 1685 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP38Q8NB14 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP38Q8NB14 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP38Q8NB14 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.14□□□□□ -1.91
USP38Q8NB14 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP38Q8NB14 Y_RNA.164-201ENST00000363709 102 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 RNY3P3-201ENST00000363816 102 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 RNU6-534P-201ENST00000364877 106 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 AL590004.2-201ENST00000404787 371 ntBASIC3.14□□□□□ -1.91
USP38Q8NB14 MIR1277-201ENST00000408536 78 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms