Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC004383.1-201ENST00000438135 289 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 RPL36AP48-201ENST00000485521 314 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC114781.4-201ENST00000513707 639 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 RNU6-314P-201ENST00000516574 104 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AL157687.1-201ENST00000554853 619 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC027176.1-201ENST00000560204 514 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 MTATP6P3-201ENST00000581686 676 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC012507.3-201ENST00000603556 477 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 MIR15A-201ENST00000607334 83 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AP001596.2-201ENST00000608410 312 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 MIR6852-201ENST00000621699 66 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC139792.3-201ENST00000623525 224 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC243829.7-201ENST00000633081 225 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 AC131280.1-202ENST00000624067 4211 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
RTL3Q8N8U3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.51□□□□□ -2.01
RTL3Q8N8U3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AL139276.1-201ENST00000311910 1001 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 RNU6-61P-201ENST00000365528 109 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 RNU4-48P-201ENST00000365559 182 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 RNU1-52P-201ENST00000384190 164 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 SNORA41-201ENST00000384675 132 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 RNU6-1158P-201ENST00000391167 107 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 SNORA40C-201ENST00000391285 128 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC068050.1-201ENST00000394891 380 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 UBE2V1P2-201ENST00000397758 440 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 FDX1P2-201ENST00000450769 375 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC083798.1-201ENST00000472671 131 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC116562.3-201ENST00000506136 177 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC117522.1-201ENST00000509821 380 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 TBCAP3-201ENST00000512475 312 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 SNORA40.12-201ENST00000516329 111 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 OR5AQ1P-201ENST00000527596 927 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC068587.5-201ENST00000528506 175 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 OR5B19P-201ENST00000531766 928 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 MIR4775-201ENST00000581168 75 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC060766.3-201ENST00000591442 263 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AL158032.1-201ENST00000605401 106 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC068944.2-201ENST00000610373 403 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AL359547.2-201ENST00000615810 418 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 U6atac.1-201ENST00000616025 117 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTL3Q8N8U3 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
RTL3Q8N8U3 Z75746.1-201ENST00000440243 2080 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC069528.2-201ENST00000624849 1991 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 RNU6-1085P-201ENST00000363576 107 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 RNY4P14-201ENST00000363656 96 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 RNU6-1322P-201ENST00000364309 107 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 RNA5SP125-201ENST00000364843 120 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 Y_RNA.372-201ENST00000365599 102 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 Y_RNA.409-201ENST00000383990 98 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 Y_RNA.481-201ENST00000384373 102 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 SNORA24.1-201ENST00000384401 135 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 MIR524-201ENST00000385242 87 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC114491.1-201ENST00000416095 246 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC009963.1-201ENST00000417265 157 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC097463.2-201ENST00000421074 142 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC000111.3-201ENST00000433478 193 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AL513328.1-201ENST00000446460 224 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AF213884.2-201ENST00000510417 903 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AP005902.1-201ENST00000521358 186 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 OR4R1P-201ENST00000529879 463 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC027807.1-201ENST00000559921 996 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AP001094.1-201ENST00000579805 193 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AL645944.1-201ENST00000603857 493 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms