Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL353752.1-201ENST00000454946 260 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 CEACAMP4-201ENST00000457676 421 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AC113155.1-201ENST00000511141 769 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-1315P-201ENST00000517187 99 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 Y_RNA.721-201ENST00000517207 102 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AC009812.2-201ENST00000517657 457 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AP004242.1-201ENST00000533701 349 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SLC44A3Q8N4M1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 RNU5A-1-201ENST00000362698 116 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-7-201ENST00000364784 107 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-8-201ENST00000365467 107 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 Y_RNA.389-201ENST00000383924 113 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 MYL8P-204ENST00000431574 518 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 RPS29P31-201ENST00000446147 164 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 RPL23AP62-201ENST00000463396 453 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 RPS23P3-201ENST00000470993 430 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 RPL7P5-201ENST00000471472 736 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AC011005.2-201ENST00000487324 359 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AC068781.1-201ENST00000488231 618 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 RPL22P13-201ENST00000493291 347 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AC022447.4-201ENST00000504053 364 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 MRPS35P2-201ENST00000508242 191 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AC084851.1-201ENST00000529105 249 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 OR1M4P-201ENST00000589199 287 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AC098826.3-201ENST00000603823 466 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AL355297.3-201ENST00000604082 446 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AL161798.1-201ENST00000604630 131 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AL033523.1-201ENST00000605153 153 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AL591516.1-201ENST00000611326 274 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AL021879.1-201ENST00000611756 288 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 MIR4272-201ENST00000635924 64 ntBASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC44A3Q8N4M1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SLC44A3Q8N4M1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.46□□□□□ -1.85
SLC44A3Q8N4M1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 RNA5SP42-201ENST00000364278 115 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.324-201ENST00000365165 102 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 MIR514A1-201ENST00000385133 98 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL445529.1-201ENST00000398713 389 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL138885.1-201ENST00000405921 675 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 RN7SKP58-201ENST00000411010 305 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AC244098.2-201ENST00000422068 99 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 HMGB3P8-201ENST00000449709 577 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 PCMTD1P1-201ENST00000455560 355 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 RNU7-170P-201ENST00000459303 61 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AC109925.1-201ENST00000478069 331 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AC108860.1-201ENST00000484521 383 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 HMGB1P22-201ENST00000505315 124 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AC105758.1-201ENST00000506038 399 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 RN7SKP83-201ENST00000516512 178 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-1271P-201ENST00000517049 105 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AC022616.4-201ENST00000522985 181 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AC022080.3-201ENST00000544433 482 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 TRAV32-201ENST00000553993 340 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL157871.3-201ENST00000557231 293 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 MYL12BP1-201ENST00000569826 507 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 MIR1273C-201ENST00000578669 77 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 CPDP1-201ENST00000579660 283 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 KLKP1-201ENST00000595979 403 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL442067.1-201ENST00000613261 223 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL360181.4-201ENST00000621752 134 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL512643.1-201ENST00000635735 524 ntBASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.46□□□□□ -1.86
SLC44A3Q8N4M1 OR4G2P-202ENST00000641004 1759 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms