Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RPL23AP35-201ENST00000451906 501 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 AC112771.1-201ENST00000463581 102 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 PTP4A1P4-201ENST00000512479 322 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 RNU4-54P-201ENST00000516428 129 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 COPS8P3-201ENST00000526024 482 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 AC004217.3-201ENST00000551552 878 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 MIR4514-201ENST00000581410 57 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 VN1R82P-201ENST00000601481 356 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 AC009033.1-201ENST00000624279 431 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 MTCO3P2-201ENST00000457365 171 ntBASIC0.4□□□□□ -2.34
VPS8Q8N3P4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 COX7A2P2-201ENST00000505291 250 ntBASIC0.4□□□□□ -2.34
VPS8Q8N3P4 AC090142.3-201ENST00000519012 385 ntBASIC0.4□□□□□ -2.34
VPS8Q8N3P4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.4□□□□□ -2.34
VPS8Q8N3P4 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.4□□□□□ -2.34
VPS8Q8N3P4 ROCK1P1-201ENST00000573767 549 ntBASIC0.4□□□□□ -2.34
VPS8Q8N3P4 SNORD39.3-201ENST00000584451 71 ntBASIC0.4□□□□□ -2.34
VPS8Q8N3P4 AC073544.1-201ENST00000600110 1595 ntBASIC0.4□□□□□ -2.35
VPS8Q8N3P4 RNU4-67P-201ENST00000364569 141 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 MRPL35P1-201ENST00000404272 572 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS8Q8N3P4 MTCO3P5-201ENST00000433620 714 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 MTND1P16-201ENST00000465177 898 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS8Q8N3P4 MZT1P2-201ENST00000604387 248 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 AP000860.1-201ENST00000605250 559 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 NDUFA8P1-201ENST00000605525 367 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 AC011374.2-201ENST00000607135 526 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 AC067863.3-201ENST00000624172 122 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS8Q8N3P4 AC100821.1-201ENST00000523153 2479 ntBASIC0.39□□□□□ -2.35
VPS8Q8N3P4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AL161935.2-201ENST00000414627 60 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 CCDC58P2-201ENST00000417131 366 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 PNRC2P1-201ENST00000423940 420 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 RNU4-77P-201ENST00000516692 156 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AC008993.2-201ENST00000631744 806 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 RNU6-1339P-201ENST00000363574 91 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 RNU6-611P-201ENST00000384276 104 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 RPS26P5-201ENST00000418544 335 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 FTH1P12-201ENST00000432137 551 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AL132857.1-201ENST00000555180 708 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AC027104.1-201ENST00000563702 681 ntBASIC0.38□□□□□ -2.35
VPS8Q8N3P4 AC134026.1-201ENST00000623249 2239 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 SNORD114-24-201ENST00000365029 72 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS8Q8N3P4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS8Q8N3P4 PTGES3P1-201ENST00000439531 483 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 PDCD5P2-201ENST00000507570 312 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 RN7SKP88-201ENST00000516847 250 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 RNU6-586P-201ENST00000517265 104 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS8Q8N3P4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS8Q8N3P4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.37□□□□□ -2.35
VPS8Q8N3P4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.37□□□□□ -2.35
VPS8Q8N3P4 7SK.8-201ENST00000612110 250 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 7SK.11-201ENST00000615477 250 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 7SK.13-201ENST00000622040 250 ntBASIC0.37□□□□□ -2.35
VPS8Q8N3P4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.37□□□□□ -2.35
VPS8Q8N3P4 MTCO1P56-201ENST00000401674 224 ntBASIC0.36□□□□□ -2.35
VPS8Q8N3P4 AC092634.6-201ENST00000418558 192 ntBASIC0.36□□□□□ -2.35
VPS8Q8N3P4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS8Q8N3P4 AC109329.1-201ENST00000518744 317 ntBASIC0.36□□□□□ -2.35
VPS8Q8N3P4 AC079598.5-201ENST00000547460 117 ntBASIC0.36□□□□□ -2.35
VPS8Q8N3P4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.36□□□□□ -2.35
VPS8Q8N3P4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
VPS8Q8N3P4 RPL22P22-201ENST00000395439 379 ntBASIC0.35□□□□□ -2.35
VPS8Q8N3P4 AL353621.1-201ENST00000418219 243 ntBASIC0.35□□□□□ -2.35
VPS8Q8N3P4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS8Q8N3P4 SNRPEP9-201ENST00000436794 238 ntBASIC0.35□□□□□ -2.35
VPS8Q8N3P4 RPS15AP9-201ENST00000439856 381 ntBASIC0.35□□□□□ -2.35
VPS8Q8N3P4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS8Q8N3P4 GTF2IP12-201ENST00000456547 356 ntBASIC0.35□□□□□ -2.35
VPS8Q8N3P4 RPL26P26-201ENST00000480251 434 ntBASIC0.35□□□□□ -2.35
VPS8Q8N3P4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
VPS8Q8N3P4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
VPS8Q8N3P4 MIR421-201ENST00000365696 85 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 SNORA51.6-201ENST00000384151 125 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 SNX2P2-201ENST00000424553 323 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 AC002381.1-201ENST00000447049 280 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 AC036111.3-201ENST00000526389 112 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms