Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLIP4Q8N3C7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 MIR412-201ENST00000362142 91 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 SNORD62.1-201ENST00000362541 86 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 RNU6-1329P-201ENST00000365664 107 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 RNU6-310P-201ENST00000384655 107 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 MIR181B1-201ENST00000385240 110 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 SNORD73A-201ENST00000386062 65 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 SNORA75.4-201ENST00000391278 119 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 RPS4XP3-201ENST00000398541 413 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AL592148.1-201ENST00000413568 445 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 TMEM167AP1-201ENST00000423409 219 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 UBE2V1P4-201ENST00000425374 344 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 Z82205.1-201ENST00000428456 297 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 Z82210.1-201ENST00000440037 231 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 ELOCP24-201ENST00000456370 334 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 Y_RNA.631-201ENST00000459607 101 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AC091153.1-201ENST00000466297 402 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 SNORA31.26-201ENST00000517250 137 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AC009902.1-201ENST00000519351 183 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 SNRPGP17-201ENST00000603780 214 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 CYP2C61P-201ENST00000604072 290 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AC004805.2-201ENST00000605382 482 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 RMST_4.1-201ENST00000616886 107 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 PISRT1.1-201ENST00000616930 107 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AC002076.2-201ENST00000617362 122 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AC098657.3-201ENST00000620434 263 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 AL669831.3-213ENST00000636676 183 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.88□□□□□ -1.95
CLIP4Q8N3C7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 MTND5P10-201ENST00000603719 1809 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 Y_RNA.197-201ENST00000364004 102 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 Y_RNA.216-201ENST00000364205 93 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 Y_RNA.445-201ENST00000384168 102 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 Y_RNA.473-201ENST00000384333 102 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 RNU6-306P-201ENST00000384617 107 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 MIR449B-201ENST00000384995 97 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 RNU6-1050P-201ENST00000410388 107 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 Y_RNA.646-201ENST00000410980 101 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 MYL8P-204ENST00000431574 518 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AL645568.3-201ENST00000433683 316 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AL512844.2-201ENST00000433990 593 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 RPL21P2-201ENST00000440049 481 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 RPL39P40-201ENST00000445481 146 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AC011005.2-201ENST00000487324 359 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 RN7SKP282-201ENST00000516824 299 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AC104576.1-201ENST00000524225 88 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 ELOCP31-201ENST00000540463 467 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AC136601.2-201ENST00000604356 474 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AP000654.2-201ENST00000605633 586 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 MIR7975-201ENST00000619350 68 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AL136164.4-201ENST00000625013 2135 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AL049641.1-201ENST00000441055 1948 ntBASIC2.87□□□□□ -1.95
CLIP4Q8N3C7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 RNU6-384P-201ENST00000364900 104 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 AL445529.1-201ENST00000398713 389 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 RNU2-68P-201ENST00000410878 191 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 Y_RNA.623-201ENST00000411128 95 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 RNU6-293P-201ENST00000411259 106 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 PGBD4P6-201ENST00000421501 610 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 AC092047.1-201ENST00000424997 240 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 HMGN2P20-201ENST00000437531 273 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 AL590664.1-201ENST00000448065 339 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 AL583843.1-201ENST00000456070 346 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 RNU7-187P-201ENST00000458985 68 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 HMGN1P10-201ENST00000474557 553 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 AC090096.1-201ENST00000489168 390 ntBASIC2.86□□□□□ -1.95
CLIP4Q8N3C7 AC110794.1-201ENST00000505816 425 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms