Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MIR4435-1-201ENST00000582552 80 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 AL138889.2-201ENST00000603883 242 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 U1.23-201ENST00000610293 146 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 RNU1-68P-201ENST00000615382 146 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 AC007318.2-201ENST00000620999 243 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 U1.39-201ENST00000621562 146 ntBASIC3.8□□□□□ -1.8
SYNE4Q8N205 AC004925.1-201ENST00000624256 2706 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNE4Q8N205 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYNE4Q8N205 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNE4Q8N205 RNU6-238P-201ENST00000363313 106 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 RNU6-702P-201ENST00000364982 107 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 RNA5SP111-201ENST00000411386 101 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 AC010655.3-201ENST00000478818 450 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 RPS4XP22-201ENST00000480755 780 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 AC078817.1-201ENST00000492623 435 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYNE4Q8N205 RNU6-470P-201ENST00000515954 104 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 RNU6-237P-201ENST00000515985 71 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 RNU6-635P-201ENST00000516651 102 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 RN7SKP272-201ENST00000516988 232 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AC025423.5-201ENST00000550230 219 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AL161670.1-201ENST00000554348 137 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 MIR4319-201ENST00000577285 85 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 FAM60BP-201ENST00000578364 658 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 MIR4644-201ENST00000579929 84 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNE4Q8N205 AC011494.1-201ENST00000596454 237 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AL670379.6-201ENST00000603753 252 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AL670379.1-201ENST00000604752 252 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AL670379.5-201ENST00000605253 252 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AL670379.8-201ENST00000605353 252 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 AL670379.7-201ENST00000605823 252 ntBASIC3.79□□□□□ -1.8
SYNE4Q8N205 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYNE4Q8N205 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYNE4Q8N205 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
SYNE4Q8N205 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNE4Q8N205 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE4Q8N205 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE4Q8N205 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE4Q8N205 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNE4Q8N205 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE4Q8N205 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SYNE4Q8N205 Y_RNA.455-201ENST00000384230 98 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 RNU6-842P-201ENST00000384269 107 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 Y_RNA.574-201ENST00000384766 95 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 RNA5SP293-201ENST00000410527 113 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 RNU6-55P-201ENST00000411092 107 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNE4Q8N205 AC128713.1-201ENST00000471495 306 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE4Q8N205 AC022493.2-201ENST00000506122 481 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNE4Q8N205 RNU6-390P-201ENST00000516259 103 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 MIR2114-201ENST00000516645 80 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 RNU6-1271P-201ENST00000517049 105 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE4Q8N205 ERHP1-201ENST00000523006 310 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 OR4H12P-201ENST00000556269 907 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNE4Q8N205 MIR3941-201ENST00000582572 103 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 SNORD84-203ENST00000584275 78 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 AC002044.1-201ENST00000606707 158 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 PISRT1.1-201ENST00000616930 107 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SYNE4Q8N205 FAM35BP-202ENST00000497389 3337 ntBASIC3.78□□□□□ -1.8
SYNE4Q8N205 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE4Q8N205 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNE4Q8N205 AC091812.1-201ENST00000432235 1948 ntBASIC3.78□□□□□ -1.81
SYNE4Q8N205 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
SYNE4Q8N205 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNE4Q8N205 Y_RNA.188-201ENST00000363952 111 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 SNORA36C-201ENST00000384289 132 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 MT-TG-201ENST00000387429 68 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 AL592148.1-201ENST00000413568 445 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 EI24P1-201ENST00000416584 867 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.77□□□□□ -1.81
SYNE4Q8N205 BX679664.1-201ENST00000434429 253 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 RNU7-187P-201ENST00000458985 68 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 AP000873.1-201ENST00000463987 400 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 RN7SL20P-201ENST00000488827 297 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 AC078918.1-201ENST00000498515 228 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.77□□□□□ -1.81
SYNE4Q8N205 AC091544.4-201ENST00000555268 342 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.77□□□□□ -1.81
SYNE4Q8N205 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNE4Q8N205 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 SNORD58B-201ENST00000607313 66 ntBASIC3.77□□□□□ -1.81
SYNE4Q8N205 AL161423.1-201ENST00000613700 262 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms