Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 AL645944.1-201ENST00000603857 493 ntBASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 AC016925.2-201ENST00000605108 242 ntBASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 AC011890.2-201ENST00000613393 294 ntBASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 Z69720.2-201ENST00000624755 279 ntBASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 CEP170P1-201ENST00000502249 4587 ntBASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 AC093908.1-201ENST00000623125 8092 ntBASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
SFTPA1Q8IWL2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SFTPA1Q8IWL2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.21□□□□□ -1.89
SFTPA1Q8IWL2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 MIR30E-201ENST00000362104 92 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-827P-201ENST00000365553 106 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-842P-201ENST00000384269 107 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-658P-201ENST00000384606 106 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 MIR606-201ENST00000384851 96 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 MIR34A-201ENST00000385130 110 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 SNORD67-201ENST00000390833 111 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 RNU2-37P-201ENST00000410695 177 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 PMCHL1-202ENST00000423102 261 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 RPL23AP50-201ENST00000434149 455 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 MTND4P19-201ENST00000446659 478 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 AC097462.2-201ENST00000504623 481 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 SMURF2P1-201ENST00000514992 481 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-327P-201ENST00000516270 127 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 Y_RNA.687-201ENST00000516558 91 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 RNA5SP309-201ENST00000516670 106 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-928P-201ENST00000516876 104 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 SYF2P1-201ENST00000550658 413 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 MTCO3P13-201ENST00000577757 781 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SFTPA1Q8IWL2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 RNA5SP502-201ENST00000362694 119 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-884P-201ENST00000363889 107 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 RNU1-140P-201ENST00000365040 165 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 SNORA33.2-201ENST00000365413 134 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AL137792.2-201ENST00000443484 235 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC008571.1-201ENST00000467232 300 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 RPS29P26-201ENST00000477483 171 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC103996.1-201ENST00000555468 102 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC109446.1-201ENST00000566172 220 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 MIR4782-201ENST00000577987 79 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC006504.6-201ENST00000590142 199 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 MIR3976-201ENST00000606807 139 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AL161629.2-201ENST00000615347 275 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 AC244205.2-202ENST00000635781 342 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SFTPA1Q8IWL2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-1317P-201ENST00000364582 104 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-933P-201ENST00000384424 107 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 SNORA75.6-201ENST00000391318 127 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 USMG5P1-201ENST00000425964 177 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 AL133396.1-201ENST00000432048 687 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 RPL9P32-201ENST00000464118 620 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 Y_RNA.661-201ENST00000516003 99 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 RNU1-61P-201ENST00000516107 151 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 RNU6-1183P-201ENST00000517054 60 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 MIR4298-201ENST00000584380 73 ntBASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.19□□□□□ -1.9
SFTPA1Q8IWL2 AC118273.1-201ENST00000525324 3006 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms