Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 CENPUP1-201ENST00000526649 1202 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 MIR4506-201ENST00000584693 77 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AC007318.2-201ENST00000620999 243 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AC243829.7-201ENST00000633081 225 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.14□□□□□ -1.91
HERC6Q8IVU3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HERC6Q8IVU3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HERC6Q8IVU3 Y_RNA.231-201ENST00000364358 102 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 U3.12-201ENST00000364498 214 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 RNU6-72P-201ENST00000384285 79 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 MIR518D-201ENST00000385014 87 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 RNA5SP219-201ENST00000390940 113 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 RPS12P18-201ENST00000442381 270 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 RPL31P41-201ENST00000477967 372 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.14□□□□□ -1.91
HERC6Q8IVU3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 RNU6-189P-201ENST00000516120 101 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 OR11H5P-201ENST00000554039 926 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 SNORA59B-202ENST00000578183 701 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 AP000907.4-201ENST00000604143 237 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 AC104458.1-201ENST00000608243 463 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HERC6Q8IVU3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.14□□□□□ -1.91
HERC6Q8IVU3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.14□□□□□ -1.91
HERC6Q8IVU3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HERC6Q8IVU3 FAM35CP-201ENST00000554755 2470 ntBASIC3.14□□□□□ -1.91
HERC6Q8IVU3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HERC6Q8IVU3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 RNU6-384P-201ENST00000364900 104 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 XGY1-201ENST00000381172 446 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 Y_RNA.390-201ENST00000383932 102 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 RNU2-3P-201ENST00000410144 191 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 RNU4-26P-201ENST00000410270 107 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 RN7SKP123-201ENST00000410732 291 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 POLHP1-201ENST00000411806 470 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 OR9R1P-201ENST00000412200 877 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AC016831.2-201ENST00000417179 352 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 snoU109.2-201ENST00000459316 135 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 RN7SL20P-201ENST00000488827 297 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AC069439.1-201ENST00000494739 167 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 RNU1-41P-201ENST00000516161 162 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 RNU1-48P-201ENST00000516400 162 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HERC6Q8IVU3 MIR5583-1-201ENST00000580941 59 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AC010525.2-201ENST00000590920 195 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AC005261.5-201ENST00000596280 355 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 AL391813.1-201ENST00000603098 260 ntBASIC3.13□□□□□ -1.91
HERC6Q8IVU3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.12□□□□□ -1.91
HERC6Q8IVU3 RNU6-858P-201ENST00000362436 107 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 RNU6-534P-201ENST00000364877 106 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 RNU1-100P-201ENST00000365255 165 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 RNU6-748P-201ENST00000384648 107 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 RNA5SP274-201ENST00000410484 108 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 CYCSP33-201ENST00000414485 327 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.12□□□□□ -1.91
HERC6Q8IVU3 MTATP6P23-201ENST00000440153 476 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.12□□□□□ -1.91
HERC6Q8IVU3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 AC116353.2-201ENST00000505332 712 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.12□□□□□ -1.91
HERC6Q8IVU3 RPL7P20-201ENST00000520308 745 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.12□□□□□ -1.91
HERC6Q8IVU3 AC092747.3-201ENST00000603769 301 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 AC091152.3-201ENST00000604227 325 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 BNIP3P10-201ENST00000605360 577 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.12□□□□□ -1.91
HERC6Q8IVU3 AC002553.4-201ENST00000616896 331 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.12□□□□□ -1.91
HERC6Q8IVU3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
HERC6Q8IVU3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.12□□□□□ -1.91
HERC6Q8IVU3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HERC6Q8IVU3 AC138393.1-203ENST00000327086 343 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 RNU6-451P-201ENST00000362921 107 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 SNORA70B-201ENST00000384210 135 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 MIR514A2-201ENST00000385131 88 ntBASIC3.11□□□□□ -1.91
HERC6Q8IVU3 MIR514A3-201ENST00000385132 88 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms