Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC138393.1-203ENST00000327086 343 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 RNU1-23P-201ENST00000363361 144 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 RNY4P34-201ENST00000364779 95 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 RNU6-169P-201ENST00000365336 107 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 SNORA20.2-201ENST00000383922 131 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 MIR676-201ENST00000390702 67 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 MIR1302-8-201ENST00000408342 128 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 RNA5SP111-201ENST00000411386 101 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AC127391.1-201ENST00000411737 98 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 EEF1A1P40-201ENST00000412883 573 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 MED13P1-201ENST00000428342 171 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL627311.1-201ENST00000431514 115 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 MTATP6P16-201ENST00000434543 526 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL161788.1-201ENST00000441805 169 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL360271.2-201ENST00000447710 161 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL133217.1-201ENST00000450980 425 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 RPL38P4-201ENST00000502376 214 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 SNORA31.23-201ENST00000517219 133 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AC233702.2-202ENST00000562547 291 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AC136619.2-201ENST00000563361 631 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 MIR3915-201ENST00000578518 97 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AC122133.1-201ENST00000613964 233 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL133173.2-201ENST00000614270 90 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AL359740.1-201ENST00000624340 592 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC138623.1-201ENST00000418060 216 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 MTCYBP1-201ENST00000454315 1119 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 PMCHL2-203ENST00000457791 237 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC018868.1-201ENST00000491307 315 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 SNORA4.4-201ENST00000515921 135 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 RNU1-86P-201ENST00000516108 154 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 Y_RNA.687-201ENST00000516558 91 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 RNU1-107P-201ENST00000516617 154 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 SNORA31.25-201ENST00000517242 134 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC118273.2-201ENST00000532092 465 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC091544.4-201ENST00000555268 342 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC007229.1-201ENST00000590455 412 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 RPL30P11-203ENST00000598995 310 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC025165.5-201ENST00000602802 578 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AL670379.4-201ENST00000605279 254 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 RNU6-91P-201ENST00000607774 107 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 U4atac.1-201ENST00000618345 95 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 YWHAEP7-203ENST00000622054 312 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AC019226.2-201ENST00000625973 424 ntBASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC50Q8IVM0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 SNORD114-19-201ENST00000363072 75 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 RNU6-529P-201ENST00000363383 104 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 RNU6-371P-201ENST00000364283 108 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 UBE2V1P10-201ENST00000414685 269 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 RPL21P90-201ENST00000415692 466 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 EDDM3CP-201ENST00000415977 425 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 MTND5P25-201ENST00000430499 799 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AC009238.1-201ENST00000442165 424 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AC009237.6-201ENST00000446969 424 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 ART2BP-201ENST00000453501 499 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AP001025.1-201ENST00000486139 332 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AC060788.1-201ENST00000521318 469 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 BNIP3P8-201ENST00000597863 560 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AC021646.1-201ENST00000605469 484 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 SDR42E1P4-201ENST00000620894 481 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AC023510.2-201ENST00000622162 746 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AC093648.1-201ENST00000623546 606 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 AL603839.4-201ENST00000624658 1005 ntBASIC1.96□□□□□ -2.1
CCDC50Q8IVM0 U8.2-201ENST00000363156 134 ntBASIC1.95□□□□□ -2.1
CCDC50Q8IVM0 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
CCDC50Q8IVM0 RNU6-843P-201ENST00000384454 104 ntBASIC1.95□□□□□ -2.1
CCDC50Q8IVM0 SNORD116-20-201ENST00000384529 92 ntBASIC1.95□□□□□ -2.1
CCDC50Q8IVM0 MIR95-201ENST00000385072 81 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms