Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.416-201ENST00000384014 113 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.471-201ENST00000384312 102 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 CYCSP32-201ENST00000440548 321 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AL139109.1-201ENST00000455491 297 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AL445433.1-201ENST00000457507 257 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 RN7SKP46-201ENST00000515942 234 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 ACA59.2-201ENST00000517061 156 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AC130289.1-201ENST00000577321 73 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 MIR3936-201ENST00000584304 110 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 FTX_2.1-201ENST00000618816 94 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 AC243829.7-201ENST00000633081 225 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 LINC01355-201ENST00000566551 5444 ntBASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
NPAS4Q8IUM7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 Y_RNA.180-201ENST00000363867 113 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 RNU1-140P-201ENST00000365040 165 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 RNA5SP22-201ENST00000365393 109 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 RNU6-487P-201ENST00000365430 104 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 RN7SKP167-201ENST00000411047 285 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 PTGES3P4-201ENST00000426243 356 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AC243964.1-201ENST00000441814 261 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 ABCF2P2-201ENST00000450549 296 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 RPL23AP62-201ENST00000463396 453 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 SNORA31.1-201ENST00000515993 133 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 SNORA31.5-201ENST00000516190 133 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 RNU6-911P-201ENST00000516523 104 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AC109329.1-201ENST00000518744 317 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AC016256.1-201ENST00000547971 354 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AC104581.2-201ENST00000572227 430 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 MIR5684-201ENST00000585074 65 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 RPS29P30-201ENST00000600975 111 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AL390123.1-201ENST00000603216 237 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AC008739.3-201ENST00000603262 127 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AC009779.6-201ENST00000603972 165 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AC006077.1-201ENST00000604746 343 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 AL354798.1-201ENST00000622505 329 ntBASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPAS4Q8IUM7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 RNU6-708P-201ENST00000384217 107 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 RNU6-843P-201ENST00000384454 104 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 RNU6-19P-201ENST00000384718 107 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 RNU6-1077P-201ENST00000410506 102 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 AL714022.1-201ENST00000439897 151 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 AL392103.1-201ENST00000447000 198 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 AL500522.2-201ENST00000448562 343 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 AL591473.1-201ENST00000464297 313 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 CKS1BP7-201ENST00000522230 235 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 MIR4474-201ENST00000579189 78 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 AC024220.1-201ENST00000603675 484 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 AC027290.2-201ENST00000623210 18662 ntBASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NPAS4Q8IUM7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 AC010680.1-201ENST00000590024 3590 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 SNORA71.3-201ENST00000362582 128 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 RNU6-213P-201ENST00000384051 104 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 MIR449B-201ENST00000384995 97 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 RNU2-25P-201ENST00000411041 191 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 RNU6-130P-201ENST00000411112 103 ntBASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.43□□□□□ -1.7
NPAS4Q8IUM7 AL353705.4-201ENST00000449661 238 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 280.5 ms