Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PTCHD4Q6ZW05 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-1115P-201ENST00000362490 106 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 Y_RNA.202-201ENST00000364083 110 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 RNA5SP51-201ENST00000364750 119 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 MIR518D-201ENST00000385014 87 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 RNA5SP252-201ENST00000391131 119 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AL513475.1-201ENST00000406602 315 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 U3.37-201ENST00000408528 213 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AL356968.1-201ENST00000416622 474 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 DBIP2-201ENST00000419076 262 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 RPL7P2-201ENST00000427639 268 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AC098831.1-201ENST00000440661 216 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 DAP3P1-201ENST00000441522 278 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 BTF3P15-201ENST00000455606 336 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 RPS27AP10-201ENST00000496103 208 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 RNU6-120P-201ENST00000516077 103 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 SNORA70.18-201ENST00000516696 98 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AC109479.2-201ENST00000517842 174 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 HIGD1AP1-201ENST00000550979 275 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 CPDP1-201ENST00000579660 283 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 AC073308.1-201ENST00000623696 305 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 SCARNA4-202ENST00000625402 129 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTCHD4Q6ZW05 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
PTCHD4Q6ZW05 AC091564.4-201ENST00000533934 2194 ntBASIC3.15□□□□□ -1.9
PTCHD4Q6ZW05 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 SNORD9-201ENST00000362566 104 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-78P-201ENST00000362897 107 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.112-201ENST00000363250 102 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 SNORA22B-201ENST00000383876 138 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 NDUFS5P4-201ENST00000412983 318 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 AC126124.2-201ENST00000413542 321 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 RPL26P9-201ENST00000457466 433 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 RN7SL132P-201ENST00000478131 296 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-377P-201ENST00000515965 102 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 ACA59.1-201ENST00000515966 143 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-976P-201ENST00000516086 111 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 AC022634.1-201ENST00000520765 532 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 AL360085.1-201ENST00000604713 532 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 AC016925.2-201ENST00000605108 242 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 AC068724.3-201ENST00000625906 87 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 MTND5P30-201ENST00000452896 1731 ntBASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.15□□□□□ -1.91
PTCHD4Q6ZW05 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 MFSD8-233ENST00000641482 4860 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AC017071.1-201ENST00000564407 2204 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.5-201ENST00000362334 102 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 RNA5SP139-201ENST00000364340 117 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 RNA5SP515-201ENST00000364570 118 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.463-201ENST00000384271 102 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 RPL23AP50-201ENST00000434149 455 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 HIGD1AP2-201ENST00000446367 280 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AC013470.1-201ENST00000453438 462 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 snoU13.28-201ENST00000459235 104 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AC034236.1-201ENST00000469891 373 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 HMGN1P10-201ENST00000474557 553 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AC022493.2-201ENST00000506122 481 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms