Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNU6-486P-201ENST00000363116 107 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AL445529.1-201ENST00000398713 389 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AL133475.1-201ENST00000404414 305 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC126124.2-201ENST00000413542 321 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 NUP35P1-201ENST00000422734 947 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 UBE2V1P4-201ENST00000425374 344 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC007969.2-201ENST00000441891 191 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 MTND1P17-201ENST00000448961 204 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 PPP1R2P5-201ENST00000457256 603 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 RPL36AP48-201ENST00000485521 314 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 SNORA31.18-201ENST00000517043 134 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 RN7SKP40-201ENST00000517211 242 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 RNA5SP454-201ENST00000517231 127 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC005476.1-201ENST00000554427 397 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC138761.3-201ENST00000579993 334 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 MIR4429-201ENST00000580105 73 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 MIR3117-201ENST00000584034 78 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AL356280.1-201ENST00000603614 379 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC096772.1-201ENST00000609146 564 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC104260.1-201ENST00000616660 539 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC024581.2-201ENST00000619986 252 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC097372.5-201ENST00000623665 376 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AL034408.1-202ENST00000636088 415 ntBASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PPP4R4Q6NUP7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 RNU6-562P-201ENST00000362731 107 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 Y_RNA.70-201ENST00000362886 110 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 RNA5SP383-201ENST00000362934 120 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 SNORD56.5-201ENST00000364281 72 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 Y_RNA.339-201ENST00000365325 102 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 RNU6-1140P-201ENST00000410517 106 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AC097463.2-201ENST00000421074 142 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 HMGB1P18-201ENST00000438801 619 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AL445687.1-201ENST00000439946 251 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 MTND4LP16-201ENST00000440828 295 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 MTCO2P3-201ENST00000442543 421 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AL133547.1-201ENST00000448546 220 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 RNU7-187P-201ENST00000458985 68 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AC104619.4-201ENST00000510773 249 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 Y_RNA.691-201ENST00000516611 103 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 SNORA64.4-201ENST00000516632 81 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AC026371.1-201ENST00000551867 419 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AC091135.1-201ENST00000585943 307 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AC009314.1-201ENST00000603871 304 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AC006077.1-201ENST00000604746 343 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AL022345.1-201ENST00000607292 135 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AC104237.2-201ENST00000612456 443 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 AL035425.3-201ENST00000564206 4996 ntBASIC3.34□□□□□ -1.87
PPP4R4Q6NUP7 MTND4P27-201ENST00000450813 1354 ntBASIC3.34□□□□□ -1.88
PPP4R4Q6NUP7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.34□□□□□ -1.88
PPP4R4Q6NUP7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-867P-201ENST00000364956 107 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-214P-201ENST00000384130 107 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 U8.11-201ENST00000384699 133 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 U8.12-201ENST00000384701 133 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AL360182.1-201ENST00000397433 468 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 MIR548K-201ENST00000408406 116 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 U6atac.2-201ENST00000408644 118 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 RPL30P4-201ENST00000429309 333 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AC012308.1-201ENST00000451232 178 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 U8.18-201ENST00000459285 133 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AC146507.2-201ENST00000460608 476 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AL133162.1-201ENST00000463228 453 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AC133134.1-201ENST00000466800 359 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 MTND5P5-201ENST00000503764 376 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-377P-201ENST00000515965 102 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 RN7SKP18-201ENST00000516005 275 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 Y_RNA.682-201ENST00000516457 100 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 SNORA70.19-201ENST00000516717 90 ntBASIC3.33□□□□□ -1.88
PPP4R4Q6NUP7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms