Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
RNF220Q5VTB9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF220Q5VTB9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNF220Q5VTB9 U3.6-201ENST00000363622 211 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 RNA5SP51-201ENST00000364750 119 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 Y_RNA.482-201ENST00000384377 111 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 MIR517A-201ENST00000385001 87 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF220Q5VTB9 ATG3P1-201ENST00000419507 911 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 AC007969.2-201ENST00000441891 191 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 RPL21P23-201ENST00000446654 460 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 SNORD105B-201ENST00000458770 79 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 AP001324.2-201ENST00000461163 319 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 SEM1P1-201ENST00000506694 209 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 RNU6-277P-201ENST00000516272 106 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 RNU6-612P-201ENST00000516909 102 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 CKS1BP7-201ENST00000522230 235 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF220Q5VTB9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF220Q5VTB9 RPL23AP78-201ENST00000599928 470 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 VN1R85P-201ENST00000601587 426 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 AC018889.1-201ENST00000605372 397 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 AC241585.2-209ENST00000638217 143 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RNF220Q5VTB9 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF220Q5VTB9 AL161912.2-201ENST00000565707 3007 ntBASIC3.25□□□□□ -1.89
RNF220Q5VTB9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF220Q5VTB9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF220Q5VTB9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF220Q5VTB9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF220Q5VTB9 SNORD9-201ENST00000362566 104 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 Y_RNA.384-201ENST00000383909 102 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 RNU6-622P-201ENST00000384272 103 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 RNU6-790P-201ENST00000384479 105 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 AL133475.1-201ENST00000404414 305 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 AL513475.1-201ENST00000406602 315 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 MIR1289-1-201ENST00000408836 144 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 AL353705.1-201ENST00000433468 480 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 AC091390.1-201ENST00000433904 331 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 NOTCH2P1-201ENST00000443481 624 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 MTND4P17-201ENST00000470444 350 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 RN7SL601P-201ENST00000471221 293 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF220Q5VTB9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF220Q5VTB9 AC090897.2-201ENST00000581715 130 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF220Q5VTB9 AC016727.1-205ENST00000605437 569 ntBASIC3.24□□□□□ -1.89
RNF220Q5VTB9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF220Q5VTB9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF220Q5VTB9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 RNU4-73P-201ENST00000363164 141 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 SNORA51.4-201ENST00000364993 124 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 Y_RNA.387-201ENST00000383918 102 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 RNU6-601P-201ENST00000384540 107 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 MIR544A-201ENST00000384855 91 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AC245054.2-201ENST00000415639 319 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 CYCSP4-201ENST00000429682 331 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 DAP3P1-201ENST00000441522 278 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AC068587.1-201ENST00000483613 781 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AP005902.1-201ENST00000521358 186 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 GLYCAM1-201ENST00000546596 285 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AC105137.2-201ENST00000569073 466 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 RPS15AP11-201ENST00000594193 385 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AC012493.2-201ENST00000595083 291 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 C8orf59P2-201ENST00000603441 271 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AL109809.4-201ENST00000603520 2185 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AC073476.4-201ENST00000628409 72 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 AC119674.1-207ENST00000641355 633 ntBASIC3.23□□□□□ -1.89
RNF220Q5VTB9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF220Q5VTB9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
RNF220Q5VTB9 RNU6-797P-201ENST00000363101 109 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 SNORD21-201ENST00000383953 95 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 RNU6-692P-201ENST00000384496 107 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AP000275.1-201ENST00000411943 390 ntBASIC3.22□□□□□ -1.89
RNF220Q5VTB9 AL356968.1-201ENST00000416622 474 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms