Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AC024060.1-201ENST00000607052 494 ntBASIC0.28□□□□□ -2.37
CCDC18Q5T9S5 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 RPS3AP37-201ENST00000419176 745 ntBASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 PNRC2P1-201ENST00000423940 420 ntBASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 MTND1P16-201ENST00000465177 898 ntBASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 AC010409.1-201ENST00000487382 476 ntBASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 MZT1P2-201ENST00000604387 248 ntBASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 AC135803.1-201ENST00000608748 565 ntBASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 AC009509.4-201ENST00000619202 509 ntBASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 AC009950.2-201ENST00000636548 183 ntBASIC0.27□□□□□ -2.37
CCDC18Q5T9S5 HMGN1P13-201ENST00000505795 138 ntBASIC0.26□□□□□ -2.37
CCDC18Q5T9S5 RNU6-202P-201ENST00000515998 96 ntBASIC0.26□□□□□ -2.37
CCDC18Q5T9S5 AC090142.3-201ENST00000519012 385 ntBASIC0.26□□□□□ -2.37
CCDC18Q5T9S5 NACAP3-201ENST00000552100 481 ntBASIC0.26□□□□□ -2.37
CCDC18Q5T9S5 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.26□□□□□ -2.37
CCDC18Q5T9S5 SNRPEP3-201ENST00000338402 276 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 SNORD114-24-201ENST00000365029 72 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 SNORD82-201ENST00000365530 70 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 RNU6-348P-201ENST00000384386 107 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 RNU6-110P-201ENST00000384508 104 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 RPL23AP95-201ENST00000426806 265 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 NANOGP2-201ENST00000435391 727 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 MTND5P14-201ENST00000441481 1267 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 AC022616.8-201ENST00000533569 253 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 AC090079.2-201ENST00000575289 768 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 FAM157A-202ENST00000615155 405 ntBASIC0.25□□□□□ -2.37
CCDC18Q5T9S5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 AL512637.2-201ENST00000431287 1256 ntBASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 PDCD5P2-201ENST00000507570 312 ntBASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 AC113420.1-201ENST00000507903 571 ntBASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 RNU6-667P-201ENST00000517186 102 ntBASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 AC018659.1-201ENST00000551083 169 ntBASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 MIR4802-201ENST00000581881 80 ntBASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 AC016542.1-201ENST00000608259 493 ntBASIC0.24□□□□□ -2.37
CCDC18Q5T9S5 MIR19B1-201ENST00000384829 87 ntBASIC0.23□□□□□ -2.37
CCDC18Q5T9S5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CCDC18Q5T9S5 MIR1262-201ENST00000408276 93 ntBASIC0.23□□□□□ -2.37
CCDC18Q5T9S5 AC013267.1-201ENST00000458227 267 ntBASIC0.23□□□□□ -2.37
CCDC18Q5T9S5 AC087897.1-201ENST00000550134 156 ntBASIC0.23□□□□□ -2.37
CCDC18Q5T9S5 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.23□□□□□ -2.37
CCDC18Q5T9S5 uc_338.22-201ENST00000622722 187 ntBASIC0.23□□□□□ -2.37
CCDC18Q5T9S5 MIR6516-201ENST00000630554 81 ntBASIC0.23□□□□□ -2.37
CCDC18Q5T9S5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CCDC18Q5T9S5 AL356776.1-201ENST00000406574 447 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 RNU2-43P-201ENST00000410306 190 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AC118282.2-201ENST00000508739 374 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 RNVU1-2-201ENST00000516326 135 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AC018618.2-201ENST00000604770 446 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 Y_RNA.170-201ENST00000363746 110 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 MIR649-201ENST00000384843 97 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 MIR135A2-201ENST00000384854 100 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 MIR329-1-201ENST00000385028 80 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 MIR514A1-201ENST00000385133 98 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 MTCYBP32-201ENST00000427945 1084 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AL358794.1-201ENST00000445689 381 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AC067940.1-201ENST00000458411 300 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 RPL36AP48-201ENST00000485521 314 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 CYCTP-201ENST00000504253 315 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 SNORA25.11-201ENST00000515935 105 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AP000860.1-201ENST00000605250 559 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 AC104465.1-201ENST00000611365 139 ntBASIC0.22□□□□□ -2.37
CCDC18Q5T9S5 RNA5SP361-201ENST00000362686 118 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 SNORD51-201ENST00000384320 80 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 RNU6-1065P-201ENST00000384513 106 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 MIR605-201ENST00000385078 83 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 BEND7P1-201ENST00000422058 457 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 CETN4P-201ENST00000432407 469 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 MEMO1P3-201ENST00000459811 302 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 AP001324.2-201ENST00000461163 319 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 AP001893.2-201ENST00000526949 202 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 AL158032.1-201ENST00000605401 106 ntBASIC0.21□□□□□ -2.38
CCDC18Q5T9S5 AC004775.1-201ENST00000607389 753 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms