Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 DEFB109B-201ENST00000382656 264 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 RNU6-1040P-201ENST00000383974 107 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AL353705.1-201ENST00000433468 480 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AL512844.2-201ENST00000433990 593 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 Z82210.1-201ENST00000440037 231 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AC006539.3-201ENST00000454258 129 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 PCMTD1P1-201ENST00000455560 355 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AC092185.1-201ENST00000491371 97 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 RNU6-120P-201ENST00000516077 103 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AC009902.1-201ENST00000519351 183 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 MIR5004-201ENST00000579078 107 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 BNIP3P16-201ENST00000589779 534 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AC012468.1-201ENST00000604888 430 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AL160281.1-201ENST00000605307 311 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 AC098657.3-201ENST00000620434 263 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 U6.99-201ENST00000637524 83 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 MTND4P1-201ENST00000457501 1466 ntBASIC3.79□□□□□ -1.8
CCDC178Q5BJE1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 MAPK10-362ENST00000641864 4484 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 Y_RNA.395-201ENST00000383945 109 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 Y_RNA.623-201ENST00000411128 95 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 RNA5SP31-201ENST00000411144 127 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 ATG3P1-201ENST00000419507 911 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 PMCHL1-202ENST00000423102 261 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 HMGN1P18-201ENST00000457642 277 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 RPS23P3-201ENST00000470993 430 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 SCARNA16.2-201ENST00000516520 172 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 RNA5SP384-201ENST00000516615 116 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 RNU6-988P-201ENST00000519081 107 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 AC109446.1-201ENST00000566172 220 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 MIR3690-201ENST00000580266 75 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 MIR2682-201ENST00000580305 110 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 AC116312.1-201ENST00000606841 314 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 RMST_4.1-201ENST00000616886 107 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC178Q5BJE1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 SNORD14B-201ENST00000364533 90 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 Y_RNA.422-201ENST00000384054 114 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 RNU6-639P-201ENST00000384074 107 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 RNU6-933P-201ENST00000384424 107 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 RNU6-738P-201ENST00000384531 106 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 MYL8P-204ENST00000431574 518 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 AL160004.2-201ENST00000432935 350 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 AL645568.3-201ENST00000433683 316 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 SNRPEP9-201ENST00000436794 238 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 FTH1P25-201ENST00000447665 469 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 RPL12P25-201ENST00000455592 494 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 snoU109.2-201ENST00000459316 135 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 RPS4XP22-201ENST00000480755 780 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 RNA5SP468-201ENST00000516782 93 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 RN7SKP295-201ENST00000517264 153 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 AC011494.1-201ENST00000596454 237 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 AC136601.2-201ENST00000604356 474 ntBASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CCDC178Q5BJE1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC178Q5BJE1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC178Q5BJE1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC178Q5BJE1 SNORA63C-201ENST00000364578 129 ntBASIC3.76□□□□□ -1.81
CCDC178Q5BJE1 RNU6-1160P-201ENST00000384546 104 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms