Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.87□□□□□ -2.11
RFX4Q33E94 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.87□□□□□ -2.11
RFX4Q33E94 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.87□□□□□ -2.11
RFX4Q33E94 AC244505.5-201ENST00000443639 207 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AC124916.1-201ENST00000444020 547 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.87□□□□□ -2.11
RFX4Q33E94 snoU109.2-201ENST00000459316 135 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 UBE2DNL-203ENST00000474922 222 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 RPL7P43-201ENST00000478876 753 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AP003072.2-201ENST00000527756 676 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AP002453.2-201ENST00000533503 320 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AC026464.5-201ENST00000562497 722 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.87□□□□□ -2.11
RFX4Q33E94 MIR4435-1-201ENST00000582552 80 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 MIR548AC-201ENST00000585049 88 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AC098848.2-201ENST00000588023 330 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.87□□□□□ -2.11
RFX4Q33E94 AL359854.1-201ENST00000614203 1594 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AC024581.2-201ENST00000619986 252 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AC138627.2-201ENST00000624202 601 ntBASIC1.87□□□□□ -2.11
RFX4Q33E94 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.87□□□□□ -2.11
RFX4Q33E94 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RFX4Q33E94 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.86□□□□□ -2.11
RFX4Q33E94 MIR412-201ENST00000362142 91 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 RNU1-72P-201ENST00000362976 153 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 RNU6-942P-201ENST00000363002 107 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 RNU6-348P-201ENST00000384386 107 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 RNU1-148P-201ENST00000384472 162 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 MIR1-2-201ENST00000384961 85 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX4Q33E94 C1DP2-201ENST00000418167 426 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX4Q33E94 AC003685.2-201ENST00000422795 395 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 MTCO3P5-201ENST00000433620 714 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 GPR143P-201ENST00000434155 205 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.86□□□□□ -2.11
RFX4Q33E94 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX4Q33E94 AC016691.1-201ENST00000441321 413 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX4Q33E94 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.86□□□□□ -2.11
RFX4Q33E94 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX4Q33E94 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX4Q33E94 SMURF2P1-201ENST00000514992 481 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 RNU1-86P-201ENST00000516108 154 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 SNORD27.1-201ENST00000516319 72 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 RNU1-107P-201ENST00000516617 154 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 Y_RNA.695-201ENST00000516715 107 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.86□□□□□ -2.11
RFX4Q33E94 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.86□□□□□ -2.11
RFX4Q33E94 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX4Q33E94 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX4Q33E94 AC110760.3-201ENST00000598794 467 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 AC025165.5-201ENST00000602802 578 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 AL590229.1-201ENST00000603497 542 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 AC087045.1-201ENST00000605856 382 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 AL158063.1-201ENST00000615349 536 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 AC138649.3-201ENST00000622154 254 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 MIR6873-201ENST00000622788 63 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 AC011155.2-201ENST00000623202 216 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 MIR3974-201ENST00000637126 96 ntBASIC1.86□□□□□ -2.11
RFX4Q33E94 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RFX4Q33E94 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RFX4Q33E94 AL354685.2-201ENST00000448218 1447 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RFX4Q33E94 RNU4-82P-201ENST00000362443 140 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 SNORA62.1-201ENST00000364287 154 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 XGY1-201ENST00000381172 446 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 RNU6-1179P-201ENST00000384667 107 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 MIR10A-201ENST00000385043 110 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 RNA5SP508-201ENST00000411327 119 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 RNA5SP270-201ENST00000411361 118 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AL627311.1-201ENST00000431514 115 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AC098826.2-201ENST00000452011 651 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX4Q33E94 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AL162395.1-201ENST00000457882 422 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 RNA5SP233-201ENST00000459153 113 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AC080013.2-201ENST00000460866 323 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AC010486.3-201ENST00000511602 785 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 MIR892C-201ENST00000516410 77 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 RNU6-410P-201ENST00000517006 107 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX4Q33E94 OR5AL2P-201ENST00000532185 920 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AC009063.1-201ENST00000563342 702 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 MTCYBP33-201ENST00000575007 1130 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AC012213.3-201ENST00000577199 777 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AC105245.1-201ENST00000581934 244 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AC040904.1-201ENST00000590850 223 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AC073539.2-201ENST00000597113 165 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms