Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL670379.4-201ENST00000605279 254 ntBASIC2.41□□□□□ -2.02
SHROOM1Q2M3G4 SNORD14A-201ENST00000606526 91 ntBASIC2.41□□□□□ -2.02
SHROOM1Q2M3G4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SHROOM1Q2M3G4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SHROOM1Q2M3G4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SHROOM1Q2M3G4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SHROOM1Q2M3G4 SNORA75B-201ENST00000384053 137 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 MIR301A-201ENST00000385261 86 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 U3.37-201ENST00000408528 213 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 RNA5SP270-201ENST00000411361 118 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AL109913.1-201ENST00000421173 514 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 MED13P1-201ENST00000428342 171 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AL353706.1-201ENST00000436728 494 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 HMGN2P10-201ENST00000448085 265 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 GZMAP1-201ENST00000503054 631 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-295P-201ENST00000516901 104 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC090572.1-201ENST00000519251 160 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AL157871.3-201ENST00000557231 293 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC006362.1-201ENST00000567392 174 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC012213.3-201ENST00000577199 777 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 MIR4782-201ENST00000577987 79 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC098848.2-201ENST00000588023 330 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC012409.4-201ENST00000612923 249 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AL157786.1-207ENST00000627771 695 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 AC008555.8-201ENST00000623602 2168 ntBASIC2.4□□□□□ -2.03
SHROOM1Q2M3G4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 SNORD3E-201ENST00000362899 217 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 RNU4-91P-201ENST00000364778 135 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 Y_RNA.359-201ENST00000365498 102 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-61P-201ENST00000365528 109 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 SNORD116-2-201ENST00000384274 95 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-348P-201ENST00000384386 107 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 SNORD116-6-201ENST00000384711 96 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 MIR1-2-201ENST00000384961 85 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 AL161651.1-201ENST00000440882 223 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 GPM6BP3-201ENST00000442797 145 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 MTCO1P19-201ENST00000443487 500 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 MTND2P22-201ENST00000444325 1033 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 RNA5SP233-201ENST00000459153 113 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 SNORA31.6-201ENST00000516241 130 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 OR5AL2P-201ENST00000532185 920 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 AC110588.1-201ENST00000559699 137 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 MIR4765-201ENST00000585007 77 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 AL359547.2-201ENST00000615810 418 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 AC093648.1-201ENST00000623546 606 ntBASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.39□□□□□ -2.03
SHROOM1Q2M3G4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 Y_RNA.33-201ENST00000362591 102 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 RNU2-63P-201ENST00000410792 194 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AL160275.3-201ENST00000423876 471 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 CALM2P2-201ENST00000428512 440 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AL591704.1-201ENST00000432574 275 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 KATNBL1P3-201ENST00000443475 909 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AL136380.1-201ENST00000447970 162 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 snoU109.2-201ENST00000459316 135 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AC116562.3-201ENST00000506136 177 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AC010424.1-201ENST00000506336 297 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 MTCO3P28-201ENST00000513351 515 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 SNORA25.11-201ENST00000515935 105 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AC068587.5-201ENST00000528506 175 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AC118273.2-201ENST00000532092 465 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AL356057.1-201ENST00000533798 831 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 MIR4528-201ENST00000577763 90 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 MIR1273C-201ENST00000578669 77 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 MIR5089-201ENST00000580047 84 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AC008521.1-201ENST00000587471 187 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 RSL24D1P11-201ENST00000591045 491 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AC174048.1-201ENST00000603389 144 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms