Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.14□□□□□ -2.39
HMGN3Q15651 AP001429.1-201ENST00000602568 530 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 AC091057.3-201ENST00000602684 733 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.14□□□□□ -2.39
HMGN3Q15651 AP005212.4-201ENST00000614206 710 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 AL158163.2-201ENST00000619110 700 ntBASIC0.14□□□□□ -2.39
HMGN3Q15651 RNU6-743P-201ENST00000364151 106 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 RNU6-670P-201ENST00000364312 104 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 RNU6-546P-201ENST00000383991 107 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 MIR548B-201ENST00000385247 97 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.13□□□□□ -2.39
HMGN3Q15651 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.13□□□□□ -2.39
HMGN3Q15651 RPL21P111-201ENST00000418453 477 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 AC063976.4-201ENST00000421971 163 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 AC104651.1-201ENST00000427559 735 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 TIMM9P1-201ENST00000436122 256 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 HSPE1P9-201ENST00000440046 311 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.13□□□□□ -2.39
HMGN3Q15651 RNA5SP290-201ENST00000517133 127 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 AP001893.2-201ENST00000526949 202 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 AL590705.4-201ENST00000532209 134 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 APOOP3-201ENST00000536787 586 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.13□□□□□ -2.39
HMGN3Q15651 AC018659.1-201ENST00000551083 169 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 AC093249.1-201ENST00000567049 203 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 MIR3664-201ENST00000579074 99 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.13□□□□□ -2.39
HMGN3Q15651 AC017083.3-201ENST00000609955 700 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 AL603758.1-201ENST00000618654 241 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.13□□□□□ -2.39
HMGN3Q15651 AC092447.10-201ENST00000620607 1652 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 FARSBP1-201ENST00000435808 1778 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
HMGN3Q15651 AC027514.1-201ENST00000588561 1603 ntBASIC0.13□□□□□ -2.39
HMGN3Q15651 MTND4P14-201ENST00000435799 1354 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 RNA5SP493-201ENST00000364115 91 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 RNU6-878P-201ENST00000384578 110 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 GTF2IP13-201ENST00000438487 386 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 RNA5SP269-201ENST00000459032 137 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 AC010631.1-201ENST00000474150 156 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 RNU6-840P-201ENST00000517275 65 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 AC068790.6-201ENST00000602558 258 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 AP001596.2-201ENST00000608410 312 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 AL590396.4-201ENST00000636779 956 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.12□□□□□ -2.39
HMGN3Q15651 RNU6-658P-201ENST00000384606 106 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 RNU1-139P-201ENST00000391307 165 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 CCNG1P1-201ENST00000406783 885 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 AC092423.1-201ENST00000430165 186 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 MOB1AP2-201ENST00000446060 614 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.11□□□□□ -2.39
HMGN3Q15651 AL353718.1-201ENST00000451028 517 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.11□□□□□ -2.39
HMGN3Q15651 MTCYBP43-201ENST00000513621 740 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 RNU6-965P-201ENST00000516721 96 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 AP003355.1-201ENST00000518956 587 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.11□□□□□ -2.39
HMGN3Q15651 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.11□□□□□ -2.39
HMGN3Q15651 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.11□□□□□ -2.39
HMGN3Q15651 MIR3169-201ENST00000578032 83 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.11□□□□□ -2.39
HMGN3Q15651 MIR5094-201ENST00000578766 85 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 AL078603.1-201ENST00000603824 313 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 AC112191.3-201ENST00000604371 277 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 AC239868.4-201ENST00000608318 671 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 MIR6134-201ENST00000617606 109 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 Z69720.2-201ENST00000624755 279 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.11□□□□□ -2.39
HMGN3Q15651 AC245060.5-201ENST00000610778 3293 ntBASIC0.11□□□□□ -2.39
HMGN3Q15651 RNU6-1274P-201ENST00000384557 107 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 MIR942-201ENST00000401111 86 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HMGN3Q15651 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.1□□□□□ -2.39
HMGN3Q15651 FTH1P12-201ENST00000432137 551 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN3Q15651 CECR9-201ENST00000453421 199 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 RPL7P43-201ENST00000478876 753 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AL160314.1-201ENST00000490836 438 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.1□□□□□ -2.39
HMGN3Q15651 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN3Q15651 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN3Q15651 AC016957.1-201ENST00000534895 309 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AL121579.1-201ENST00000555129 305 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.1□□□□□ -2.39
HMGN3Q15651 AC079610.2-201ENST00000604818 690 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AL353765.1-201ENST00000605514 183 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AC006270.3-201ENST00000605967 1036 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AC130324.3-201ENST00000614165 542 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AC013476.2-201ENST00000614456 459 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AL590240.4-201ENST00000616908 390 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AC138627.2-201ENST00000624202 601 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 AC079416.3-201ENST00000624479 549 ntBASIC0.1□□□□□ -2.39
HMGN3Q15651 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HMGN3Q15651 Y_RNA.99-201ENST00000363138 105 ntBASIC0.09□□□□□ -2.4
HMGN3Q15651 RNU6-360P-201ENST00000390944 104 ntBASIC0.09□□□□□ -2.4
HMGN3Q15651 VN1R42P-201ENST00000424651 344 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms