Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU5A-6P-201ENST00000384136 116 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 RNU6-434P-201ENST00000384376 107 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 GSTA9P-201ENST00000406231 611 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 MTCYBP8-201ENST00000422855 651 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 AL591043.1-201ENST00000432461 424 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 AC002486.1-201ENST00000435098 391 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.36□□□□□ -2.03
SCN1BQ07699 SNRPFP3-201ENST00000457792 225 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 GMFBP1-201ENST00000467831 427 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 RPL23AP45-201ENST00000476406 468 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN1BQ07699 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN1BQ07699 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.36□□□□□ -2.03
SCN1BQ07699 AC105417.1-201ENST00000514691 285 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 SNORA4.4-201ENST00000515921 135 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 RN7SKP57-201ENST00000517248 293 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN1BQ07699 AC118273.2-201ENST00000532092 465 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 CYCSP26-201ENST00000534107 320 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN1BQ07699 IMMP1LP2-201ENST00000552954 492 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 MIR5583-1-201ENST00000580941 59 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 AC078795.2-201ENST00000602835 1252 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 AL670379.2-201ENST00000604983 252 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 AL137847.3-201ENST00000611521 109 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
SCN1BQ07699 MIR8057-201ENST00000620957 69 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 AP003400.5-201ENST00000624827 617 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 U4.7-201ENST00000638126 106 ntBASIC2.36□□□□□ -2.03
SCN1BQ07699 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SCN1BQ07699 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN1BQ07699 AL139276.1-201ENST00000311910 1001 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 RNU6-1210P-201ENST00000363775 107 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 Y_RNA.381-201ENST00000365666 102 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 RNA5SP210-201ENST00000391034 120 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 RNU6-903P-201ENST00000391270 109 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 BTF3L4P1-201ENST00000413813 468 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 MTCO2P19-201ENST00000427513 598 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN1BQ07699 AC112220.1-201ENST00000434628 355 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 AC016691.1-201ENST00000441321 413 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.35□□□□□ -2.03
SCN1BQ07699 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN1BQ07699 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SCN1BQ07699 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN1BQ07699 CKS1BP7-201ENST00000522230 235 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.35□□□□□ -2.03
SCN1BQ07699 AP005136.1-201ENST00000579765 429 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 MIR5092-201ENST00000583139 88 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 AC002044.1-201ENST00000606707 158 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 AC007684.1-201ENST00000609671 477 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 AC007792.1-201ENST00000623023 402 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCN1BQ07699 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.35□□□□□ -2.03
SCN1BQ07699 AL365361.1-201ENST00000566942 3481 ntBASIC2.35□□□□□ -2.03
SCN1BQ07699 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 U3.13-201ENST00000364804 214 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 RNU1-140P-201ENST00000365040 165 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 SNORA25B-201ENST00000365507 128 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 RNU6-1103P-201ENST00000384150 107 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 RNU6-517P-201ENST00000384362 110 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 RNU6-1274P-201ENST00000384557 107 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 MIR561-201ENST00000385216 97 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 RPS4XP8-201ENST00000402039 771 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN1BQ07699 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN1BQ07699 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN1BQ07699 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.34□□□□□ -2.03
SCN1BQ07699 AC007969.2-201ENST00000441891 191 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 AC011753.1-201ENST00000451001 220 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN1BQ07699 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.34□□□□□ -2.03
SCN1BQ07699 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN1BQ07699 SNORA74D-201ENST00000516404 141 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 AP001893.2-201ENST00000526949 202 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 AC023050.3-201ENST00000541142 333 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 HIF1AP1-201ENST00000553642 175 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 MIR3126-201ENST00000577443 74 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 MIR5195-201ENST00000583555 115 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 AP001596.2-201ENST00000608410 312 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 AL161423.1-201ENST00000613700 262 ntBASIC2.34□□□□□ -2.03
SCN1BQ07699 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.34□□□□□ -2.03
SCN1BQ07699 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.34□□□□□ -2.03
SCN1BQ07699 AC002543.1-201ENST00000299783 1954 ntBASIC2.34□□□□□ -2.04
SCN1BQ07699 MTND4P14-201ENST00000435799 1354 ntBASIC2.34□□□□□ -2.04
SCN1BQ07699 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SCN1BQ07699 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SCN1BQ07699 Y_RNA.1-201ENST00000352915 104 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 RNU6-105P-201ENST00000363909 104 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 U8.8-201ENST00000365399 135 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 RNU6-1119P-201ENST00000384349 108 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 Y_RNA.480-201ENST00000384364 102 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 Y_RNA.582-201ENST00000391023 95 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 SNORD23.1-201ENST00000408212 104 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 AL353193.1-201ENST00000421444 268 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms