Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU7-63P-201ENST00000459054 62 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 RPS29P25-201ENST00000481709 171 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.12□□□□□ -2.07
CKAP4Q07065 RNA5SP356-201ENST00000515972 94 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 RNU6-1256P-201ENST00000516539 103 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 RN7SKP219-201ENST00000516825 296 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 Y_RNA.704-201ENST00000516851 102 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 RNU6-685P-201ENST00000517088 95 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.12□□□□□ -2.07
CKAP4Q07065 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.12□□□□□ -2.07
CKAP4Q07065 AC092325.1-201ENST00000566449 554 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.12□□□□□ -2.07
CKAP4Q07065 MIR4801-201ENST00000582704 82 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AC008752.3-201ENST00000588113 712 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.12□□□□□ -2.07
CKAP4Q07065 BNIP3P30-201ENST00000601184 574 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AL355877.2-201ENST00000603670 358 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 RBM11P1-201ENST00000604951 799 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AC008536.2-201ENST00000607284 349 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.12□□□□□ -2.07
CKAP4Q07065 uc_338.11-201ENST00000619132 160 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AC025034.2-201ENST00000623264 286 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.12□□□□□ -2.07
CKAP4Q07065 MTND1P37-201ENST00000636562 264 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 MIR7515-201ENST00000637837 67 ntBASIC2.12□□□□□ -2.07
CKAP4Q07065 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CKAP4Q07065 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CKAP4Q07065 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.11□□□□□ -2.07
CKAP4Q07065 SNORA62.1-201ENST00000364287 154 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 RNU6-534P-201ENST00000364877 106 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 RNU6-996P-201ENST00000365438 107 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 Y_RNA.381-201ENST00000365666 102 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 SNORA69-201ENST00000383895 132 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 MIR23B-201ENST00000384832 97 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 SNORA11.4-201ENST00000408823 129 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.11□□□□□ -2.07
CKAP4Q07065 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.11□□□□□ -2.07
CKAP4Q07065 ELOCP14-201ENST00000428070 331 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 MRPS10P2-201ENST00000431226 381 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 ELOCP7-201ENST00000439968 331 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 BNIP3P2-201ENST00000441221 577 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 AC025750.2-201ENST00000442609 450 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 MTCO3P38-201ENST00000468910 766 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 FAM92A1P2-202ENST00000504766 877 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 AC092436.1-201ENST00000506450 503 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 AC108078.2-201ENST00000510750 236 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.11□□□□□ -2.07
CKAP4Q07065 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.11□□□□□ -2.07
CKAP4Q07065 RNU6-1281P-201ENST00000516223 105 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
CKAP4Q07065 OR5AL2P-201ENST00000532185 920 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.11□□□□□ -2.07
CKAP4Q07065 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.11□□□□□ -2.07
CKAP4Q07065 MIR4703-201ENST00000577728 79 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 AC008521.1-201ENST00000587471 187 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 AL162413.1-201ENST00000603198 110 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 AC104458.1-201ENST00000608243 463 ntBASIC2.11□□□□□ -2.07
CKAP4Q07065 FER-210ENST00000628534 558 ntTSL 5 BASIC2.11□□□□□ -2.07
CKAP4Q07065 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.11□□□□□ -2.07
CKAP4Q07065 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CKAP4Q07065 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CKAP4Q07065 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.1□□□□□ -2.07
CKAP4Q07065 Y_RNA.89-201ENST00000363031 102 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 SNORA38-201ENST00000363946 132 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 Y_RNA.255-201ENST00000364581 97 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 RNU6-1029P-201ENST00000384109 107 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 Y_RNA.576-201ENST00000384781 102 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 RNU2-33P-201ENST00000410344 192 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 RPS12P24-201ENST00000412619 387 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AC027124.2-201ENST00000428249 105 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 MTND1P2-201ENST00000430604 821 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 MTND1P18-201ENST00000448191 573 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AC073415.1-201ENST00000449240 153 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 AC108938.1-201ENST00000451204 136 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 RPS29P15-201ENST00000458329 171 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 RNU6-953P-201ENST00000459154 107 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 AC006512.1-201ENST00000468816 291 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AL163973.1-201ENST00000484753 577 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 RPL39P36-201ENST00000490784 156 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 RNU6-677P-201ENST00000516914 101 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.1□□□□□ -2.07
CKAP4Q07065 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.1□□□□□ -2.07
CKAP4Q07065 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 SNRPGP18-201ENST00000553000 214 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.1□□□□□ -2.07
CKAP4Q07065 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.1□□□□□ -2.07
CKAP4Q07065 AC007938.3-201ENST00000604965 623 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 MIR7106-201ENST00000612419 65 ntBASIC2.1□□□□□ -2.07
CKAP4Q07065 AC012409.4-201ENST00000612923 249 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms