Protein–RNA interactions for Protein: Q05209

PTPN12, Tyrosine-protein phosphatase non-receptor type 12, humanhuman

Known RBP Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12Q05209 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN12Q05209 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PTPN12Q05209 U3.6-201ENST00000363622 211 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 Y_RNA.183-201ENST00000363882 113 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 SNORD27-201ENST00000363981 72 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 RNU6-140P-201ENST00000384566 108 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN12Q05209 TMEM167AP1-201ENST00000423409 219 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 MTCO3P29-201ENST00000432119 779 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 snoU109.2-201ENST00000459316 135 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 RPS26P15-201ENST00000488067 348 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 AC007458.1-201ENST00000542812 373 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 AC012433.1-201ENST00000588916 398 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 AL139395.1-201ENST00000603662 160 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 AC009318.2-201ENST00000610917 651 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.61□□□□□ -1.67
PTPN12Q05209 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN12Q05209 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN12Q05209 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN12Q05209 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN12Q05209 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN12Q05209 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN12Q05209 SNORD50.1-201ENST00000362987 71 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 Y_RNA.105-201ENST00000363182 111 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 U3.13-201ENST00000364804 214 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 RNU5E-7P-201ENST00000365290 117 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 Y_RNA.358-201ENST00000365491 99 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 RNU6-611P-201ENST00000384276 104 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 Y_RNA.562-201ENST00000384695 113 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PTPN12Q05209 RNA5SP424-201ENST00000390988 115 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN12Q05209 MIR548I3-201ENST00000408378 149 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 MIR548I1-201ENST00000408810 149 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 RNU4-61P-201ENST00000411243 107 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 RNU2-64P-201ENST00000411315 191 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN12Q05209 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN12Q05209 NDUFB4P6-201ENST00000436819 366 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN12Q05209 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN12Q05209 CYCSP35-201ENST00000451978 304 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 AC098869.1-201ENST00000481627 292 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 RPL30P10-201ENST00000488148 337 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN12Q05209 RN7SKP289-201ENST00000517244 295 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 MIR3690-201ENST00000580266 75 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN12Q05209 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN12Q05209 LINC02471-203ENST00000641941 4752 ntBASIC4.6□□□□□ -1.67
PTPN12Q05209 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PTPN12Q05209 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PTPN12Q05209 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN12Q05209 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN12Q05209 Y_RNA.123-201ENST00000363338 102 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 Y_RNA.478-201ENST00000384358 107 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN12Q05209 RNA5SP104-201ENST00000410989 118 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 RAC1P3-201ENST00000416129 580 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.59□□□□□ -1.67
PTPN12Q05209 RPS6P12-201ENST00000432491 726 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN12Q05209 AL356535.1-201ENST00000440335 398 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 BX510359.1-201ENST00000456973 237 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN12Q05209 RN7SKP210-201ENST00000459176 261 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.59□□□□□ -1.67
PTPN12Q05209 AC025465.3-201ENST00000510570 311 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN12Q05209 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.59□□□□□ -1.67
PTPN12Q05209 RNU6-1282P-201ENST00000516735 96 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 RNU6-111P-201ENST00000517179 105 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.59□□□□□ -1.67
PTPN12Q05209 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN12Q05209 AC008011.1-201ENST00000545989 227 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN12Q05209 MIR4782-201ENST00000577987 79 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN12Q05209 AC136601.2-201ENST00000604356 474 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AC090617.7-201ENST00000623952 126 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 AP000560.1-201ENST00000624150 1937 ntBASIC4.59□□□□□ -1.67
PTPN12Q05209 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PTPN12Q05209 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
PTPN12Q05209 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN12Q05209 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.58□□□□□ -1.68
PTPN12Q05209 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.58□□□□□ -1.68
PTPN12Q05209 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN12Q05209 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN12Q05209 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN12Q05209 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PTPN12Q05209 SNORA40C-201ENST00000391285 128 ntBASIC4.58□□□□□ -1.68
PTPN12Q05209 RNU2-25P-201ENST00000411041 191 ntBASIC4.58□□□□□ -1.68
PTPN12Q05209 RNU6-130P-201ENST00000411112 103 ntBASIC4.58□□□□□ -1.68
PTPN12Q05209 ATP5A1P2-201ENST00000412323 255 ntBASIC4.58□□□□□ -1.68
PTPN12Q05209 AC096920.1-201ENST00000423991 241 ntBASIC4.58□□□□□ -1.68
PTPN12Q05209 AC098614.2-201ENST00000426040 255 ntBASIC4.58□□□□□ -1.68
PTPN12Q05209 AL591043.1-201ENST00000432461 424 ntBASIC4.58□□□□□ -1.68
PTPN12Q05209 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN12Q05209 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN12Q05209 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms