Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RNU6-1222P-201ENST00000384615 107 ntBASIC1.02□□□□□ -2.25
LSM6P62312 UBE2V1P10-201ENST00000414685 269 ntBASIC1.02□□□□□ -2.25
LSM6P62312 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM6P62312 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM6P62312 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM6P62312 MTND5P25-201ENST00000430499 799 ntBASIC1.02□□□□□ -2.25
LSM6P62312 TOMM22P2-201ENST00000430735 237 ntBASIC1.02□□□□□ -2.25
LSM6P62312 RSL24D1P8-201ENST00000434442 492 ntBASIC1.02□□□□□ -2.25
LSM6P62312 AL135790.2-201ENST00000437701 267 ntBASIC1.02□□□□□ -2.25
LSM6P62312 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM6P62312 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.02□□□□□ -2.25
LSM6P62312 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.02□□□□□ -2.25
LSM6P62312 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.02□□□□□ -2.25
LSM6P62312 AC027338.1-201ENST00000514840 825 ntBASIC1.02□□□□□ -2.25
LSM6P62312 AC026616.1-201ENST00000523157 525 ntBASIC1.02□□□□□ -2.25
LSM6P62312 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.02□□□□□ -2.25
LSM6P62312 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM6P62312 AL512347.1-201ENST00000566420 503 ntBASIC1.02□□□□□ -2.25
LSM6P62312 AC012414.6-201ENST00000568241 401 ntBASIC1.02□□□□□ -2.25
LSM6P62312 SNORA77B-201ENST00000578179 125 ntBASIC1.02□□□□□ -2.25
LSM6P62312 AC104984.5-201ENST00000586878 94 ntBASIC1.02□□□□□ -2.25
LSM6P62312 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM6P62312 AL355472.4-201ENST00000610233 626 ntBASIC1.02□□□□□ -2.25
LSM6P62312 ICE2P2-201ENST00000483823 2787 ntBASIC1.02□□□□□ -2.25
LSM6P62312 MIR378A-201ENST00000362177 66 ntBASIC1.01□□□□□ -2.25
LSM6P62312 RNA5SP99-201ENST00000364020 114 ntBASIC1.01□□□□□ -2.25
LSM6P62312 SNORA62.1-201ENST00000364287 154 ntBASIC1.01□□□□□ -2.25
LSM6P62312 MIR19A-201ENST00000384878 82 ntBASIC1.01□□□□□ -2.25
LSM6P62312 RNU6-278P-201ENST00000390945 109 ntBASIC1.01□□□□□ -2.25
LSM6P62312 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LSM6P62312 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.01□□□□□ -2.25
LSM6P62312 CBX3P6-201ENST00000430257 527 ntBASIC1.01□□□□□ -2.25
LSM6P62312 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.01□□□□□ -2.25
LSM6P62312 AC079140.2-201ENST00000506193 142 ntBASIC1.01□□□□□ -2.25
LSM6P62312 AP006587.4-201ENST00000526053 529 ntBASIC1.01□□□□□ -2.25
LSM6P62312 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LSM6P62312 MIR4298-201ENST00000584380 73 ntBASIC1.01□□□□□ -2.25
LSM6P62312 AP000942.3-201ENST00000603702 160 ntBASIC1.01□□□□□ -2.25
LSM6P62312 AL157834.3-201ENST00000615543 103 ntBASIC1.01□□□□□ -2.25
LSM6P62312 MIR6715A-201ENST00000615929 79 ntBASIC1.01□□□□□ -2.25
LSM6P62312 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.01□□□□□ -2.25
LSM6P62312 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LSM6P62312 AL512643.1-201ENST00000635735 524 ntBASIC1.01□□□□□ -2.25
LSM6P62312 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LSM6P62312 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1□□□□□ -2.25
LSM6P62312 RNA5SP493-201ENST00000364115 91 ntBASIC1□□□□□ -2.25
LSM6P62312 SNORD1A-201ENST00000364968 72 ntBASIC1□□□□□ -2.25
LSM6P62312 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1□□□□□ -2.25
LSM6P62312 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
LSM6P62312 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1□□□□□ -2.25
LSM6P62312 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1□□□□□ -2.25
LSM6P62312 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1□□□□□ -2.25
LSM6P62312 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1□□□□□ -2.25
LSM6P62312 RPS6P15-201ENST00000431996 751 ntBASIC1□□□□□ -2.25
LSM6P62312 JTBP1-201ENST00000441314 247 ntBASIC1□□□□□ -2.25
LSM6P62312 NEFMP1-201ENST00000443423 1006 ntBASIC1□□□□□ -2.25
LSM6P62312 RPS29P28-201ENST00000446439 141 ntBASIC1□□□□□ -2.25
LSM6P62312 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1□□□□□ -2.25
LSM6P62312 snoU13.14-201ENST00000459372 104 ntBASIC1□□□□□ -2.25
LSM6P62312 RPL30P1-201ENST00000488676 339 ntBASIC1□□□□□ -2.25
LSM6P62312 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1□□□□□ -2.25
LSM6P62312 RNU6-965P-201ENST00000516721 96 ntBASIC1□□□□□ -2.25
LSM6P62312 RNU6-64P-201ENST00000517119 105 ntBASIC1□□□□□ -2.25
LSM6P62312 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1□□□□□ -2.25
LSM6P62312 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1□□□□□ -2.25
LSM6P62312 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1□□□□□ -2.25
LSM6P62312 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1□□□□□ -2.25
LSM6P62312 AC137800.2-201ENST00000574375 120 ntBASIC1□□□□□ -2.25
LSM6P62312 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
LSM6P62312 MIR8063-201ENST00000621930 81 ntBASIC1□□□□□ -2.25
LSM6P62312 AC112204.3-201ENST00000623822 332 ntBASIC1□□□□□ -2.25
LSM6P62312 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LSM6P62312 RNU6-944P-201ENST00000364023 107 ntBASIC0.99□□□□□ -2.25
LSM6P62312 RNU6-743P-201ENST00000364151 106 ntBASIC0.99□□□□□ -2.25
LSM6P62312 RNU4-51P-201ENST00000364206 140 ntBASIC0.99□□□□□ -2.25
LSM6P62312 RNU6-166P-201ENST00000384371 107 ntBASIC0.99□□□□□ -2.25
LSM6P62312 AC009518.2-201ENST00000418056 731 ntBASIC0.99□□□□□ -2.25
LSM6P62312 AL953862.1-201ENST00000423016 168 ntBASIC0.99□□□□□ -2.25
LSM6P62312 RPS27P16-201ENST00000425758 201 ntBASIC0.99□□□□□ -2.25
LSM6P62312 AL591704.1-201ENST00000432574 275 ntBASIC0.99□□□□□ -2.25
LSM6P62312 UBE2V1P8-201ENST00000437166 265 ntBASIC0.99□□□□□ -2.25
LSM6P62312 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.99□□□□□ -2.25
LSM6P62312 AC027119.1-201ENST00000440877 241 ntBASIC0.99□□□□□ -2.25
LSM6P62312 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.99□□□□□ -2.25
LSM6P62312 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
LSM6P62312 HMGB1P30-201ENST00000492455 606 ntBASIC0.99□□□□□ -2.25
LSM6P62312 RNU7-40P-201ENST00000516397 64 ntBASIC0.99□□□□□ -2.25
LSM6P62312 MTND1P36-201ENST00000522384 936 ntBASIC0.99□□□□□ -2.25
LSM6P62312 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.99□□□□□ -2.25
LSM6P62312 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.99□□□□□ -2.25
LSM6P62312 AC104072.1-201ENST00000568817 668 ntBASIC0.99□□□□□ -2.25
LSM6P62312 MIR3169-201ENST00000578032 83 ntBASIC0.99□□□□□ -2.25
LSM6P62312 VN1R80P-201ENST00000597126 338 ntBASIC0.99□□□□□ -2.25
LSM6P62312 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.99□□□□□ -2.25
LSM6P62312 AL078604.3-201ENST00000615580 211 ntBASIC0.99□□□□□ -2.25
LSM6P62312 AC006927.2-201ENST00000639256 389 ntBASIC0.99□□□□□ -2.25
LSM6P62312 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
LSM6P62312 MIR302D-201ENST00000362275 68 ntBASIC0.98□□□□□ -2.25
LSM6P62312 RNU6-289P-201ENST00000364093 107 ntBASIC0.98□□□□□ -2.25
LSM6P62312 Y_RNA.255-201ENST00000364581 97 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms