Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.61□□□□□ -2.31
LSM3P62310 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.61□□□□□ -2.31
LSM3P62310 PGBD4P5-201ENST00000445958 426 ntBASIC0.61□□□□□ -2.31
LSM3P62310 HSPE1P13-201ENST00000451143 297 ntBASIC0.61□□□□□ -2.31
LSM3P62310 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.61□□□□□ -2.31
LSM3P62310 snoU13.15-201ENST00000459407 104 ntBASIC0.61□□□□□ -2.31
LSM3P62310 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.61□□□□□ -2.31
LSM3P62310 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.61□□□□□ -2.31
LSM3P62310 HMGB1P28-201ENST00000507778 552 ntBASIC0.61□□□□□ -2.31
LSM3P62310 PSMC1P5-201ENST00000512850 177 ntBASIC0.61□□□□□ -2.31
LSM3P62310 SNORD116-28-201ENST00000516123 91 ntBASIC0.61□□□□□ -2.31
LSM3P62310 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.61□□□□□ -2.31
LSM3P62310 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.61□□□□□ -2.31
LSM3P62310 AP000873.5-201ENST00000533906 236 ntBASIC0.61□□□□□ -2.31
LSM3P62310 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.61□□□□□ -2.31
LSM3P62310 AC093012.1-202ENST00000549403 582 ntBASIC0.61□□□□□ -2.31
LSM3P62310 AL512310.8-201ENST00000550183 120 ntBASIC0.61□□□□□ -2.31
LSM3P62310 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.61□□□□□ -2.31
LSM3P62310 AC009977.1-201ENST00000586015 570 ntBASIC0.61□□□□□ -2.31
LSM3P62310 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.61□□□□□ -2.31
LSM3P62310 ZNF92P2-201ENST00000600543 1059 ntBASIC0.61□□□□□ -2.31
LSM3P62310 BNIP3P30-201ENST00000601184 574 ntBASIC0.61□□□□□ -2.31
LSM3P62310 KATNBL1P5-201ENST00000605015 517 ntBASIC0.61□□□□□ -2.31
LSM3P62310 AC040896.1-201ENST00000613819 479 ntBASIC0.61□□□□□ -2.31
LSM3P62310 MIR8065-201ENST00000620577 100 ntBASIC0.61□□□□□ -2.31
LSM3P62310 AC093648.1-201ENST00000623546 606 ntBASIC0.61□□□□□ -2.31
LSM3P62310 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
LSM3P62310 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
LSM3P62310 AL161781.1-201ENST00000354277 403 ntBASIC0.6□□□□□ -2.31
LSM3P62310 RNU6-655P-201ENST00000362858 107 ntBASIC0.6□□□□□ -2.31
LSM3P62310 RNU6-650P-201ENST00000365658 111 ntBASIC0.6□□□□□ -2.31
LSM3P62310 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.6□□□□□ -2.31
LSM3P62310 RNU6-968P-201ENST00000384076 107 ntBASIC0.6□□□□□ -2.31
LSM3P62310 AL359634.1-202ENST00000404721 284 ntBASIC0.6□□□□□ -2.31
LSM3P62310 DPRXP1-201ENST00000426312 460 ntBASIC0.6□□□□□ -2.31
LSM3P62310 AL589872.1-201ENST00000426602 288 ntBASIC0.6□□□□□ -2.31
LSM3P62310 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.6□□□□□ -2.31
LSM3P62310 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.6□□□□□ -2.31
LSM3P62310 AC132479.1-201ENST00000449160 144 ntBASIC0.6□□□□□ -2.31
LSM3P62310 COX6CP14-201ENST00000469580 174 ntBASIC0.6□□□□□ -2.31
LSM3P62310 SNORA31.3-201ENST00000516029 96 ntBASIC0.6□□□□□ -2.31
LSM3P62310 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.6□□□□□ -2.31
LSM3P62310 AC018630.3-201ENST00000542637 96 ntBASIC0.6□□□□□ -2.31
LSM3P62310 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.6□□□□□ -2.31
LSM3P62310 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.6□□□□□ -2.31
LSM3P62310 AC136932.1-201ENST00000574771 208 ntBASIC0.6□□□□□ -2.31
LSM3P62310 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.6□□□□□ -2.31
LSM3P62310 MIR3973-201ENST00000579824 107 ntBASIC0.6□□□□□ -2.31
LSM3P62310 VN1R83P-201ENST00000595685 445 ntBASIC0.6□□□□□ -2.31
LSM3P62310 AL022345.2-201ENST00000606307 135 ntBASIC0.6□□□□□ -2.31
LSM3P62310 AL365434.2-201ENST00000607979 234 ntBASIC0.6□□□□□ -2.31
LSM3P62310 AL355472.4-201ENST00000610233 626 ntBASIC0.6□□□□□ -2.31
LSM3P62310 AC005332.6-201ENST00000613178 446 ntBASIC0.6□□□□□ -2.31
LSM3P62310 AC063943.3-201ENST00000615562 356 ntBASIC0.6□□□□□ -2.31
LSM3P62310 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.6□□□□□ -2.31
LSM3P62310 OR4G3P-201ENST00000633500 913 ntBASIC0.6□□□□□ -2.31
LSM3P62310 AL161935.2-201ENST00000414627 60 ntBASIC0.59□□□□□ -2.31
LSM3P62310 UBE2V1P10-201ENST00000414685 269 ntBASIC0.59□□□□□ -2.31
LSM3P62310 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.59□□□□□ -2.31
LSM3P62310 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.59□□□□□ -2.31
LSM3P62310 PIGFP2-201ENST00000421400 651 ntBASIC0.59□□□□□ -2.31
LSM3P62310 DEFB130D-201ENST00000426866 237 ntBASIC0.59□□□□□ -2.31
LSM3P62310 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.59□□□□□ -2.31
LSM3P62310 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.59□□□□□ -2.31
LSM3P62310 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
LSM3P62310 SLC2A13P1-201ENST00000531560 322 ntBASIC0.59□□□□□ -2.31
LSM3P62310 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.59□□□□□ -2.31
LSM3P62310 AC005786.1-201ENST00000588553 154 ntBASIC0.59□□□□□ -2.31
LSM3P62310 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.59□□□□□ -2.31
LSM3P62310 VN1R107P-201ENST00000601784 209 ntBASIC0.59□□□□□ -2.31
LSM3P62310 AC013412.1-201ENST00000610687 192 ntBASIC0.59□□□□□ -2.31
LSM3P62310 AC016911.1-201ENST00000613297 452 ntBASIC0.59□□□□□ -2.31
LSM3P62310 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.59□□□□□ -2.31
LSM3P62310 AC091895.1-201ENST00000624494 256 ntBASIC0.59□□□□□ -2.31
LSM3P62310 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
LSM3P62310 Y_RNA.500-201ENST00000384466 111 ntBASIC0.58□□□□□ -2.32
LSM3P62310 RNU6-331P-201ENST00000384724 107 ntBASIC0.58□□□□□ -2.32
LSM3P62310 SNORA11.2-201ENST00000408318 127 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
LSM3P62310 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.58□□□□□ -2.32
LSM3P62310 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.58□□□□□ -2.32
LSM3P62310 AC009518.2-201ENST00000418056 731 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AC013410.2-201ENST00000422627 201 ntBASIC0.58□□□□□ -2.32
LSM3P62310 C8orf59P1-201ENST00000429930 303 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AL591043.1-201ENST00000432461 424 ntBASIC0.58□□□□□ -2.32
LSM3P62310 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.58□□□□□ -2.32
LSM3P62310 MTND2P20-201ENST00000440805 661 ntBASIC0.58□□□□□ -2.32
LSM3P62310 MTND5P14-201ENST00000441481 1267 ntBASIC0.58□□□□□ -2.32
LSM3P62310 RNA5SP269-201ENST00000459032 137 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AC145146.1-201ENST00000496370 254 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AC097473.1-201ENST00000508142 408 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AC010468.3-201ENST00000508225 458 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AC009646.1-201ENST00000510455 318 ntBASIC0.58□□□□□ -2.32
LSM3P62310 RNU6-583P-201ENST00000516012 92 ntBASIC0.58□□□□□ -2.32
LSM3P62310 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.58□□□□□ -2.32
LSM3P62310 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.58□□□□□ -2.32
LSM3P62310 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.58□□□□□ -2.32
LSM3P62310 HIGD1AP17-201ENST00000554576 276 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AL133153.1-201ENST00000557756 303 ntBASIC0.58□□□□□ -2.32
LSM3P62310 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms