Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP004607.1-201ENST00000524456 203 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN20P56880 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN20P56880 AC022080.3-201ENST00000544433 482 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AC006199.1-201ENST00000548728 219 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 DNAJC8P1-201ENST00000554535 372 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AC025281.1-201ENST00000567026 265 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN20P56880 AC023043.3-201ENST00000593113 385 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AC022306.2-201ENST00000617563 647 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 AL008636.1-201ENST00000625038 1018 ntBASIC2.72□□□□□ -1.97
CLDN20P56880 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
CLDN20P56880 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN20P56880 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN20P56880 RNU6-845P-201ENST00000362578 103 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 RNU6-1013P-201ENST00000384180 107 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 RNU6-831P-201ENST00000384548 107 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 MIR450B-201ENST00000401182 78 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN20P56880 AL096701.2-201ENST00000416920 238 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN20P56880 IFNA20P-201ENST00000436840 528 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN20P56880 HIGD1AP2-201ENST00000446367 280 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 MTND5P20-201ENST00000448677 143 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN20P56880 AC117440.1-201ENST00000474107 571 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 RPS26P21-201ENST00000475397 348 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN20P56880 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN20P56880 SNORD19.2-201ENST00000516978 73 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN20P56880 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN20P56880 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN20P56880 AL121821.2-201ENST00000556081 394 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN20P56880 AP000787.2-201ENST00000604432 568 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AC021646.1-201ENST00000605469 484 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 RNU6-85P-201ENST00000605989 107 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AC092794.2-201ENST00000620933 563 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AC007318.2-201ENST00000620999 243 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN20P56880 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN20P56880 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.98
CLDN20P56880 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CLDN20P56880 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN20P56880 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
CLDN20P56880 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN20P56880 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN20P56880 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
CLDN20P56880 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-37P-201ENST00000362692 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-1252P-201ENST00000363054 104 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 Y_RNA.166-201ENST00000363730 102 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-11P-201ENST00000364234 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNA5SP139-201ENST00000364340 117 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-7-201ENST00000364784 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU1-100P-201ENST00000365255 165 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-8-201ENST00000365467 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 CD24P4-201ENST00000382840 243 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-25P-201ENST00000383873 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-1-201ENST00000383898 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-48P-201ENST00000384161 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-36P-201ENST00000384172 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-4P-201ENST00000384205 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-5P-201ENST00000384238 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-3P-201ENST00000384314 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-16P-201ENST00000384385 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-15P-201ENST00000384534 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-2-201ENST00000384627 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-29P-201ENST00000384637 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-9-201ENST00000384776 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-33P-201ENST00000384793 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 MIR767-201ENST00000390228 109 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RN7SKP32-201ENST00000410167 303 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU2-49P-201ENST00000410666 184 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.7□□□□□ -1.98
CLDN20P56880 MTND3P8-201ENST00000412909 339 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 AC096649.2-201ENST00000416186 393 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN20P56880 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN20P56880 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.7□□□□□ -1.98
CLDN20P56880 AC092001.1-201ENST00000453012 261 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 AC006026.2-201ENST00000457376 180 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-329P-201ENST00000459618 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 HMGN1P12-201ENST00000499125 195 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU4-49P-201ENST00000516080 140 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-864P-201ENST00000516256 108 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-256P-201ENST00000516747 97 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 SNORA31.26-201ENST00000517250 137 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN20P56880 AP000889.2-201ENST00000532684 490 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 AC243972.3-201ENST00000539655 198 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN20P56880 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN20P56880 OR1M4P-201ENST00000589199 287 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 AC008121.1-201ENST00000603244 268 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 AC123912.5-201ENST00000605470 343 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 RNU6-6P-201ENST00000606623 107 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 FAM157A-202ENST00000615155 405 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms