Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORA20.3-201ENST00000516880 132 ntBASIC2.62□□□□□ -1.99
CDH11P55287 PSMA3P-201ENST00000555485 635 ntBASIC2.62□□□□□ -1.99
CDH11P55287 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH11P55287 AC021739.1-201ENST00000559631 174 ntBASIC2.62□□□□□ -1.99
CDH11P55287 LINC00933-203ENST00000559812 219 ntBASIC2.62□□□□□ -1.99
CDH11P55287 MIR4782-201ENST00000577987 79 ntBASIC2.62□□□□□ -1.99
CDH11P55287 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH11P55287 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH11P55287 ATP1B3P1-201ENST00000605365 821 ntBASIC2.62□□□□□ -1.99
CDH11P55287 AC010378.1-201ENST00000619270 362 ntBASIC2.62□□□□□ -1.99
CDH11P55287 AL136221.1-201ENST00000621449 509 ntBASIC2.62□□□□□ -1.99
CDH11P55287 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDH11P55287 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
CDH11P55287 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.62□□□□□ -1.99
CDH11P55287 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH11P55287 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH11P55287 AC091564.4-201ENST00000533934 2194 ntBASIC2.61□□□□□ -1.99
CDH11P55287 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH11P55287 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.61□□□□□ -1.99
CDH11P55287 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH11P55287 Y_RNA.86-201ENST00000363020 111 ntBASIC2.61□□□□□ -1.99
CDH11P55287 RNU6-266P-201ENST00000364225 107 ntBASIC2.61□□□□□ -1.99
CDH11P55287 Y_RNA.324-201ENST00000365165 102 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH11P55287 AL162578.1-201ENST00000406202 378 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AC016831.2-201ENST00000417179 352 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH11P55287 AC107083.1-201ENST00000439643 279 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH11P55287 GSTA11P-201ENST00000452866 669 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AC008571.1-201ENST00000467232 300 ntBASIC2.61□□□□□ -1.99
CDH11P55287 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.61□□□□□ -1.99
CDH11P55287 AC018710.1-201ENST00000506509 158 ntBASIC2.61□□□□□ -1.99
CDH11P55287 RNU6-1314P-201ENST00000517139 104 ntBASIC2.61□□□□□ -1.99
CDH11P55287 BTF3P12-201ENST00000519620 469 ntBASIC2.61□□□□□ -1.99
CDH11P55287 CYCSP27-201ENST00000527643 293 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH11P55287 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH11P55287 NACAP3-201ENST00000552100 481 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH11P55287 BNIP3P10-201ENST00000605360 577 ntBASIC2.61□□□□□ -1.99
CDH11P55287 RPL23AP88-201ENST00000605759 454 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AC087045.1-201ENST00000605856 382 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
CDH11P55287 AL161629.2-201ENST00000615347 275 ntBASIC2.61□□□□□ -1.99
CDH11P55287 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH11P55287 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH11P55287 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDH11P55287 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH11P55287 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH11P55287 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDH11P55287 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CDH11P55287 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.6□□□□□ -1.99
CDH11P55287 Y_RNA.100-201ENST00000363141 102 ntBASIC2.6□□□□□ -1.99
CDH11P55287 SNORA9.2-201ENST00000365361 133 ntBASIC2.6□□□□□ -1.99
CDH11P55287 MIR10A-201ENST00000385043 110 ntBASIC2.6□□□□□ -1.99
CDH11P55287 EEF1A1P41-201ENST00000414667 207 ntBASIC2.6□□□□□ -1.99
CDH11P55287 USP9YP20-201ENST00000419224 558 ntBASIC2.6□□□□□ -1.99
CDH11P55287 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH11P55287 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH11P55287 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH11P55287 AC010486.1-201ENST00000511793 424 ntBASIC2.6□□□□□ -1.99
CDH11P55287 SNORA9.3-201ENST00000516383 129 ntBASIC2.6□□□□□ -1.99
CDH11P55287 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH11P55287 FAM157A-202ENST00000615155 405 ntBASIC2.6□□□□□ -1.99
CDH11P55287 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH11P55287 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.6□□□□□ -1.99
CDH11P55287 Z69720.2-201ENST00000624755 279 ntBASIC2.6□□□□□ -1.99
CDH11P55287 AC100810.6-201ENST00000638068 285 ntBASIC2.6□□□□□ -1.99
CDH11P55287 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDH11P55287 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDH11P55287 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH11P55287 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDH11P55287 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH11P55287 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CDH11P55287 RNU6-942P-201ENST00000363002 107 ntBASIC2.59□□□□□ -1.99
CDH11P55287 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
CDH11P55287 RNU6-254P-201ENST00000363377 107 ntBASIC2.59□□□□□ -1.99
CDH11P55287 SNORA5B-201ENST00000363786 132 ntBASIC2.59□□□□□ -1.99
CDH11P55287 SNORA80A-201ENST00000363922 136 ntBASIC2.59□□□□□ -1.99
CDH11P55287 Y_RNA.373-201ENST00000365600 103 ntBASIC2.59□□□□□ -1.99
CDH11P55287 RNU6-898P-201ENST00000365627 104 ntBASIC2.59□□□□□ -1.99
CDH11P55287 RNU6-72P-201ENST00000384285 79 ntBASIC2.59□□□□□ -1.99
CDH11P55287 EIF4E2P1-201ENST00000393781 255 ntBASIC2.59□□□□□ -1.99
CDH11P55287 RNA5SP492-201ENST00000411330 114 ntBASIC2.59□□□□□ -1.99
CDH11P55287 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH11P55287 PGBD4P6-201ENST00000421501 610 ntBASIC2.59□□□□□ -1.99
CDH11P55287 SAR1AP4-201ENST00000429225 591 ntBASIC2.59□□□□□ -1.99
CDH11P55287 RPS15AP5-201ENST00000436276 388 ntBASIC2.59□□□□□ -1.99
CDH11P55287 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH11P55287 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH11P55287 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH11P55287 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH11P55287 AC007547.1-201ENST00000462177 490 ntBASIC2.59□□□□□ -1.99
CDH11P55287 RN7SL297P-201ENST00000483161 293 ntBASIC2.59□□□□□ -1.99
CDH11P55287 AC083906.5-201ENST00000503722 328 ntBASIC2.59□□□□□ -1.99
CDH11P55287 TBCAP3-201ENST00000512475 312 ntBASIC2.59□□□□□ -1.99
CDH11P55287 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
CDH11P55287 AC022634.1-201ENST00000520765 532 ntBASIC2.59□□□□□ -1.99
CDH11P55287 AC107953.1-201ENST00000522216 297 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms